Detailed information of EGACTEQ4350017386-PD in Actinia equina

Genomic Location: WHPX01001316.1:257776...264697
NR annotation: XP_031549339.1, E3 ubiquitin-protein ligase SH3RF1-like [Actinia tenebrosa]
Species abbreviation AEQUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for EGACTEQ4350017386-PD in AEQUI (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A5D8S5E3 ubiquitin-protein ligase SH3RF1 OS=Danio rerio OX=7955 GN=sh3rf1 PE=2 SV=2
Q6NRD3E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus laevis OX=8355 GN=sh3rf1 PE=1 SV=1
Q8TEJ3E3 ubiquitin-protein ligase SH3RF3 OS=Homo sapiens OX=9606 GN=SH3RF3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006151 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018
all species →		SH3_1SH3 domainDomainInterproscan
PF13445
all species →		zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001452
all species →		DomainSH3 domainInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR050384
all species →		FamilyEndophilin/SH3RFInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR027370
all species →		DomainZinc finger, RING-type, eukaryoticInterproscan
IPR036028
all species →		Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR028502
all species →		DomainE3 ubiquitin-protein ligase SH3RF3, RING finger, HC subclassInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14167
all species →		SH3 DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0032436
all species →		Biological Processpositive regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0046330
all species →		Biological Processpositive regulation of JNK cascadeInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12171SH3RF, POSH; E3 ubiquitin-protein ligase SH3RFEC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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