Gene detail

Detailed information of EGACTEQ4350019603-PA in Actinia equina

Genomic Location: WHPX01001123.1:718003...728860
NR annotation: XP_031555728.1, myeloid differentiation primary response protein MyD88-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5FB30	Superoxide dismutase [Mn], mitochondrial OS=Macaca nemestrina OX=9545 GN=SOD2 PE=2 SV=1
Q8HXP3	Superoxide dismutase [Mn], mitochondrial OS=Macaca fascicularis OX=9541 GN=SOD2 PE=2 SV=3
Q8HXP6	Superoxide dismutase [Mn], mitochondrial OS=Pongo pygmaeus OX=9600 GN=SOD2 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02777	Sod_Fe_C	Iron/manganese superoxide dismutases, C-terminal domain	Domain	Interproscan
PF00081	Sod_Fe_N	Iron/manganese superoxide dismutases, alpha-hairpin domain	Domain	Interproscan
PF13676	TIR_2	TIR domain	Domain	Interproscan
PF00531	Death	Death domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036324	Homologous_superfamily	Manganese/iron superoxide dismutase, N-terminal domain superfamily	Interproscan
IPR019832	Domain	Manganese/iron superoxide dismutase, C-terminal	Interproscan
IPR019833	Binding_site	Manganese/iron superoxide dismutase, binding site	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR000157	Domain	Toll/interleukin-1 receptor homology (TIR) domain	Interproscan
IPR035897	Homologous_superfamily	Toll/interleukin-1 receptor homology (TIR) domain superfamily	Interproscan
IPR019831	Domain	Manganese/iron superoxide dismutase, N-terminal	Interproscan
IPR000488	Domain	Death domain	Interproscan
IPR036314	Homologous_superfamily	Manganese/iron superoxide dismutase, C-terminal domain superfamily	Interproscan
IPR050265	Family	Iron/Manganese Superoxide Dismutase	Interproscan
IPR001189	Family	Manganese/iron superoxide dismutase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11404	SUPEROXIDE DISMUTASE 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004784	Molecular Function	superoxide dismutase activity	Interproscan
GO:0006801	Biological Process	superoxide metabolic process	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan