Detailed information of EGACTEQ4350019879-PD in Actinia equina

Genomic Location: WHPX01000606.1:2243...30979
NR annotation: XP_031575301.1, transient receptor potential cation channel subfamily A member 1-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P00860Ornithine decarboxylase OS=Mus musculus OX=10090 GN=Odc1 PE=1 SV=2
P09057Ornithine decarboxylase OS=Rattus norvegicus OX=10116 GN=Odc1 PE=1 SV=1
P27117Ornithine decarboxylase OS=Bos taurus OX=9913 GN=ODC1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF02784Orn_Arg_deC_NPyridoxal-dependent decarboxylase, pyridoxal binding domainDomainInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF00278Orn_DAP_Arg_deCPyridoxal-dependent decarboxylase, C-terminal sheet domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009006Homologous_superfamilyAlanine racemase/group IV decarboxylase, C-terminalInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR022653Binding_siteOrn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding siteInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR029066Homologous_superfamilyPLP-binding barrelInterproscan
IPR000183FamilyOrnithine/DAP/Arg decarboxylaseInterproscan
IPR022644DomainOrn/DAP/Arg decarboxylase 2, N-terminalInterproscan
IPR052076FamilyTransient receptor potential cation channelInterproscan
IPR002433FamilyOrnithine decarboxylaseInterproscan
IPR022643DomainOrn/DAP/Arg decarboxylase 2, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47143TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0006596Biological Processpolyamine biosynthetic processInterproscan

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