Gene detail

Detailed information of EGACTEQ4350020461-PA in Actinia equina

Genomic Location: WHPX01001440.1:1046925...1052720
NR annotation: XP_031572538.1, uncharacterized protein LOC116306591 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

EGACTEQ4350020461-PA

CTCTGGAATCAACAAAGCTGTGGCGATTCTGCTATAATCTAGCAATTACAAAATCCGATTTCAGAACGATGGAATTGAAGTTTTCCTTGAGTAACATTGTGGCTCTTGCACTTCTCGTTACTATTATGGTAATGGAGTTCCATATCAGTTCCCAGCAGCACTTCTTCTCGAGCGATTATTATCCAATAGAAAACTCCGACGGCTACGCGCTGATCAATTCCGTTTACAAGTCCTTCAGCACCGCAAGCTTCGCTACGTGTCTGCTGGCCTGTGAAGCAGACATGACTTGTATGAGCCTGAACTTTCTCATGACAACCAGTACATGTGATCTGAACACACAGACCAAGGAATCTACACCAGTATATTTTATACAGAGACATAACAGTATCTATTCCATCAACCCTTCTGGAAGAATAGtatTAAAGAAAGGAACAAAAGACAATCCTGCCAAGTCTTGTCTAGATGTATTGAAGAGCGGCGCTTCAGCTGGGACAGGCGAGTACTGGTTAGACCCCgccaacacagggagcccaatgcAAGCTTACTGTGACATGACAACAGATGGGGGTGGATGGACTGTGGTCACAAAGTTACTCCAACCAAGCAACACTCCATTGACTCCTCTCAAGCCAGAAACCTATGAGGTCATCAAAGAATACAACAGAACAGACGTGAACGTCATGCCAATGggagccgccatgttggatatcAAGAACAAGATGGGATTCCACCAGATTCATTTTTATTGTCGCAAGGTATCTGTCGGAAGAGTAGTGAGCATCATGACCAGAAACAACACCGATGGACAAGCTGTAGTAAGTTTCTTTACCGAACCAGGTACAGCCTCGGTACGCCCTGCTGCTTGTGATTCGTTTGATACACTGCCTGATGACACGTCAATGCTTAGTGGAAATTGCAGTGAATGGGGTGATACTCCGGCCAATGAGTGGGGATCATCGTGCTGTATGGGTCAAATGAGAATGGCTGCTCTGGCTTTTCATACAAGTCGATCACACGGTTTTGAATTTGTCGATTATTATTCGTGCGACAATAAAGTTCCAGCAAGCAAAGACTTTGCTGTGGCACCCGGTGTGAATGACACGTGGCAAATGTCTGTGCGCTGATTATAACACTcgacaagagaatattaagtaagagagcacatcttcCATACATGGGTCTGCAATCATAgaagttttttgaaaatctattttaagTTCCCGCGCAAgtttgagctatttttagcatgcgattcctgattggtcagagttgcgaaagaaaaatgtttagttccgGACAATAAAAATGCCTTCAAAATCATTAAAAAGTTTAAATGATTAAAGTATCCGATGTGCTCTTCATAGACGATTTAAACATTAACTtaacaattgatgtaaaagaaaattgaaaaagatcTAATCAGGATGATTTTCAGTATACGAACAAGCTAAAAAAAGCGAAGATGCCATGGGGAAgaaaatcacaataaaaaatgcgatgaaaataTCGAAAAACCTACAGTGAAGACAGCCAAAAAAGCATTTATCGTAGCGGTTTCTATAGTAAATAAGGTAAAAGAAGACGATAAACAAGTacagtattttgtttcacaaACGAATCAGAACAAACTATTTGCACCGAAATGTGCCGAAGAAAACTTTCTGTTTAGATTGCCAAAATAcggtattgcttactatcaatcacgtgacttttttggagttgactgggagcaaacaagcggttgacttgggggcaactagcgggtgctaagtcaaaacatatcaaaataagtcctcaaactatcgtatttgaatattttcacgacatcaaaccagaaaacaagagatcaaaataatctccaggattctacaagccatcaaaaaagagctattaccggaagtgacgtctattcaTAGCAACCTATTTAAATTTATGCAAAAGACACATTGCCCAttgagaaaaggtgaattaatgaAAACGTTTGAGTATTAAAACTAGAACTTGCTTTCATGTTTTGCACCATGAATTTTCGCTCCACCTCCATGTTCAGGcatttttttcataacttttcaaCTTCTAAAGTCTCCAACCGGACAATATAAATACAATCAAGATATCGGCCAAGAACAAAAATtgaatcaaacttagtatttgaggattcgaatttttcaaaaatatattatttttacctgaCCGAAGGGCATTTTACTTGCGATTTTTCCGCCAGATGCTCTCAATTCGGCGTATTTGTGTCTTTATGCTTAGTTCTCCTATTCCGAGCAGCTTGACTGTTTTCAGAtatcttaaaacctcttctttttactggtaaacaactgaatccaacagtaaatgctaaattttaagcttttttttaactctttactcggtgaattcaacaagtttgttcATCCGCTGAAATCCGGCTCTTTCGCAAACGagtccaatctaccttcattttagatgtccattagataacttttcattttgaaaacactgaagttcaggtcagaagtacgtgttcttggg

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01410	COLFI	Fibrillar collagen C-terminal domain	Family	Interproscan
PF00024	PAN_1	PAN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR000885	Domain	Fibrillar collagen, C-terminal	Interproscan
IPR003609	Domain	PAN/Apple domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16146	INTELECTIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005201	Molecular Function	extracellular matrix structural constituent	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0070492	Molecular Function	oligosaccharide binding	Interproscan