Gene detail

Detailed information of EGACTEQ4350021256-PA in Actinia equina

Genomic Location: WHPX01001253.1:582353...590187
NR annotation: XP_031563267.1, tRNA selenocysteine 1-associated protein 1-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9NX07	tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens OX=9606 GN=TRNAU1AP PE=1 SV=1
Q1RMJ7	tRNA selenocysteine 1-associated protein 1 OS=Bos taurus OX=9913 GN=TRNAU1AP PE=2 SV=1
Q80VC6	tRNA selenocysteine 1-associated protein 1 OS=Mus musculus OX=10090 GN=Trnau1ap PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF17654	Trnau1ap	Selenocysteine tRNA 1 associated proteins	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR041085	Domain	tRNA selenocysteine 1-associated protein 1, C-terminal	Interproscan
IPR040434	Family	tRNA selenocysteine 1-associated protein 1	Interproscan
IPR034510	Domain	SECp43, RNA recognition motif 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37457	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0001514	Biological Process	selenocysteine incorporation	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25102	TRNAU1AP; tRNA selenocysteine 1-associated protein 1	-	Transfer RNA biogenesis	ko03016	deepkoala