Detailed information of EGACTEQ4350021335-PA in Actinia equina

Genomic Location: WHPX01001474.1:43415...61735
NR annotation: XP_031562119.1, U3 small nucleolar RNA-associated protein 18 homolog isoform X2 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5SSI6U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN=Utp18 PE=1 SV=1
Q9Y5J1U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=UTP18 PE=1 SV=3
Q9FMU5U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g14050 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR045161FamilyU3 small nucleolar RNA-associated protein 18Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18359WD-REPEAT PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034388Cellular ComponentPwp2p-containing subcomplex of 90S preribosomeInterproscan

TOP