Detailed information of EGACTEQ4350023894-PA in Actinia equina

Genomic Location: WHPX01001405.1:433684...447492
NR annotation: XP_031565156.1, nuclear factor NF-kappa-B p105 subunit-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P19838Nuclear factor NF-kappa-B p105 subunit OS=Homo sapiens OX=9606 GN=NFKB1 PE=1 SV=2
Q04861Nuclear factor NF-kappa-B p105 subunit OS=Gallus gallus OX=9031 GN=NFKB1 PE=2 SV=2
Q6F3J0Nuclear factor NF-kappa-B p105 subunit OS=Canis lupus familiaris OX=9615 GN=NFKB1 PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilyRHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16179RHD_dimerRel homology dimerisation domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00554RHD_DNA_bindRel homology DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR000451FamilyNF-kappa-B/DorsalInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR002909DomainIPT domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR033926DomainNFkappaB IPT domainInterproscan
IPR032397DomainRel homology dimerisation domainInterproscan
IPR030492Conserved_siteRel homology domain, conserved siteInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR011539DomainRel homology domain, DNA-binding domainInterproscan
IPR037059Homologous_superfamilyRel homology domain (RHD), DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24169NUCLEAR FACTOR NF-KAPPA-B PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02580NFKB1; nuclear factor NF-kappa-B p105 subunit-Transcription factorsko03000deepkoala

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