Gene detail

Detailed information of EGACTEQ4350024961-PA in Actinia equina

Genomic Location: WHPX01000148.1:541494...543277
NR annotation: XP_048587155.1, uncharacterized protein LOC116619804 isoform X3 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q5R7I3	HMG box-containing protein 1 OS=Pongo abelii OX=9601 GN=HBP1 PE=2 SV=2
Q2KJ34	HMG box-containing protein 1 OS=Bos taurus OX=9913 GN=HBP1 PE=2 SV=1
Q62661	HMG box-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Hbp1 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan
PF07496	zf-CW	CW-type Zinc Finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009071	Domain	High mobility group box domain	Interproscan
IPR011124	Domain	Zinc finger, CW-type	Interproscan
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR050140	Family	SRY-related HMG-box transcription factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10270	SOX TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan