Gene detail

Detailed information of EGACTEQ4350029451-PA in Actinia equina

Genomic Location: WHPX01000328.1:296608...306720
NR annotation: XP_031555185.1, guanine nucleotide exchange factor DBS-like isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350029451-PA

ATGGCAAATAAAAACCAAGGTACAGaagaaGAGCCTTCACAGGAGCCCAAGATCAGAGCATATGACATTGCTGAAATATTACAAGAGAACTATGCATTCTTGTCAGGTGGAAAAGACCATGATAACAACTTGATAGTCACCATCCCTAGTGATTCAAAAATCAACCTGGCAGACGACAATGATATCAAAATAGTTTTCAAGTATCTTTTAGATTTGTCATCAAGaTTTTTTGACAATGAAGAATGTGTAAAACAAGAATTCACTGTGATATTAGATAGACGAAAAGGACGGTGGAGCAATGTCAATGCCACCCTGGCAAAGCTAAAGAATACTTTCCCATCTCCTATCAACTGTGTATTCGTGTTAAAACCACAAGGGATAATCCAGAAATTTATGGGTGGAAGCGCAAGCCAAGAAGCGCAGGCAACGTTCAAGATTGTGGTACTTGGGAGCGTAGCAGACTTGCAAACCTATATTGAACAAGACCAGCTGTCAATTGATTTGGGAGGAAAATTGGAATACAATCATGAAGAATGGATAGAAAACAGAAGTGCTATCGAAAGATTTGATTGTAAGGTCGAAGAAATATCGAAAAAGCTTGACATGATGCGAAGAAAATTTGAGCGAACGGAGATAACCTCTAGCATACAGGAAATGGAGTTCACTCTGGAATCACAGAAAGAAATATGGAAGGATATTAAAGAAGATATTATTAGTACAAGAATGACAGGGGTAACTTTGCTTAAATGTATTCACCCAAGTAGGAATAAAGacgatgaaaatgataatgCTGTTGGACCAGACGTCAAAGCCAATACCACCGAACTCGAAGGACTcttcaaaaaattaaacgatTCTGATAAAgaatttgaaagattttttgaaaatcatgaaaTAAAGTTTCGACAAGGGATAGAAATATCGTTATTTGAGCTGGAAGTTGGTCAGATTACAGGACTCCTTTTCGCAGCGACCAGTAAAGTGTCGACAATGGTTGACGTAGGAGACAGCAGAATGGCTGCCGAAAAACTATTGGACGAGCTACACACGTTTAAGACTACTACGTCACGAGATCCTATCAGTCGAGCCAAAGCCCTGATTGAGAAGGGAAAGGAATTAGCAGAGAAAGACTCACTATCGAAAAGAACCGTGAAGATGAGATGCGACGAGCTGTCACAATCGTGTGCTGAATTGAACAACAAGATCGAGATGAGAGAAAAACAACTGAAAAATGCCATGGATATCCATGATTGTCTGCAGCagGTGAGTGGGTGGTGCACAAAAGGGAGCGATCTTCTCGCGACACAACCAGTCGAGAAATTCCAGACCTCTGAAGGAGCAGAGAAATGTCTGGAAGAGATAGAGAGATTCCTTAAAGATCGACAAGGCATAAGTTTAAAGAAGCTGAACCAACTAGAAAAAATGAGCAAAGAATTAGGGAATACATTTCTAATTAATAAAGTGAAAGATTCGTTGAAGAGGATTGGTCAGGTGAATGAAATGATGACCAAGAGAGAGAACAGTCTCAAGCGCATGGTGGCCAAGAGACCTGTACAGCCAGTCACAGCTCTCCAGGTTGACAAAGGAGAACCAAAACGAAAATCAAGCTCGCCGTCAAGCGCGCCCAAATCCGCAGAATCGAAACGGAAGATGAGCTCTGCATCTGCAGGTGAAGCGCGGAAAGTAAAACCCAGTCCTACTCCTAAAAGACCCGTGTCTATCGTAGTATCGAATAATTCCGATCCACCATCACCTGTACCTTTAGCGAAAAACTACGCCAAGGCTGTATCTATACCAGACCTCTTGGTAAGTAAGAGGGCTGGAGCGggatttgtcatcatcatcatcgtcattgtcattgtcaccaccatcgtcgtcgtcgtcgtcgtcgccatcatcgtcaccattgTCAACATCATCACTGCCCTACCGTCAtcactattgtcatcatcactgcGCCATCAACATCGTCCAATCACACCATCATATATAAGCTATCGTAACATTCATGACACATTGCACCACGAACATCATTACCTTTTTTGA

Transcript

EGACTEQ4350029451-PA

Protein

Uniprot

Uniprot term	Description
O15068	Guanine nucleotide exchange factor DBS OS=Homo sapiens OX=9606 GN=MCF2L PE=1 SV=2
Q63406	Guanine nucleotide exchange factor DBS OS=Rattus norvegicus OX=10116 GN=Mcf2l PE=1 SV=3
Q64096	Guanine nucleotide exchange factor DBS OS=Mus musculus OX=10090 GN=Mcf2l PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13716	CRAL_TRIO_2	Divergent CRAL/TRIO domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018159	Repeat	Spectrin/alpha-actinin	Interproscan
IPR036865	Homologous_superfamily	CRAL-TRIO lipid binding domain superfamily	Interproscan
IPR001251	Domain	CRAL-TRIO lipid binding domain	Interproscan
IPR051336	Family	Rho GTPase-activating Guanine Nucleotide Exchange Factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22826	RHO GUANINE EXCHANGE FACTOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08486	STX1B_2_3; syntaxin 1B/2/3	-	Exosome	ko04147	deepkoala