Gene detail

Detailed information of EGACTEQ4350030811-PA in Actinia equina

Genomic Location: WHPX01001324.1:246866...257547
NR annotation: XP_031569695.1, uncharacterized protein LOC116304162 isoform X2 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan
PF00057	Ldl_recept_a	Low-density lipoprotein receptor domain class A	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036055	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR023415	Conserved_site	Low-density lipoprotein (LDL) receptor class A, conserved site	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR002172	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR050685	Family	Low-density lipoprotein receptor	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24270	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan