Gene detail

Detailed information of EGACTEQ4350031307-PA in Actinia equina

Genomic Location: WHPX01000873.1:15045...18048
NR annotation: KXJ14231.1, 120.7 kDa protein in NOF-FB transposable element [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350031307-PA

atgaaaccaataaaaaaacaatcttcaGCGTACTCAAATTATTTGACCAagaattttaaatcattttcaaacaaaGGTAAAGATCTCCCAGCAGTCTCTAAAATAGCTTCTAAAAAGTGGAAGCGACTCACTGCCGAGGAAAAAGATAGCTATGATATGAATGACATAACTACTGGTTCTCTCGAATCCAGAATGCCAAAAGGTAAAAGAACGCCACCATCTACCAGCCCAAGTTGTCCTATTTTTTCGATaggaatgaaaaacaaacacaacaacTGTTGGTTGAACGCTTTGTTGCAATCTTTCTCAGTTACCACTTTAGGTGATATTACAACAGAGGACGCAAAACCACCATTTCCAATGATGTTCAATTACCTTGCCATGATTTTTACAAGACTTAAGGAAAGTGCAGATTATACAAGGCCATTGAATCCCACTGATTTACTCAAGCAATTACACAAAAAGGGTCTGAAAATTGTGCAATACAAGAATTCCTGTTGCACTTGTGGAAATTCAAGAGAGAGTGAAGAGGATTCATTTCATTCACTTGCTGTGGAGCTCCCCAGAAACGGAATGACATCTTCAGTAAAGGACTGCCTCTTTGAATATTTCAAGGAAGAAGTTCTTATCGATGACAACAAATTAGAATGTGGGACTTGTCGTCAAAAGACTTGTCAAACACGACAGGGTTTTTTAAAAACCTGCCCCCAGAACTTTGTCTGTGTACTAAAACGTAATGATGTCACCGCAAATACTAAAGATCATTCTCCATTGACATTGGACATCACAATCGATGTATCACAGTTGAAGCACGAGGGCTCTCCACCCACTGAATACATATTAGCAGCTGTAATACTCCACAAAGGACAGGCGTTGAGTTCAGGTCATTATGTTGCCCTACAAATTTTCCCTGACAATGGTACTGTAGTACTTTTTGATGACGAAAAGGTCGAACATAAAAACCTTGCATACTTGTCTAAAAGAATAGTCACAAGAGAAGTATACATGCTGTTTTATGTTAGAGTTGAtggagaaaaagataaaaacactGTACACTCAGCGGAGATCGAGGACGCGAGCAAGTATACCGATTTCAAAAGTGAATTCTCTCACAATAAAAGTGGTTTCGACAGTGTAAACAACATACAAAGCGAAGACGGAGCGCAAAACGACAACAAACACAAGATTGAAGTTCACGATACAAGTATTGACGACGCACGTACagctgaaaatgaaaaacagcaaGAACACAAATATATTTCACCCTATGACGCACTGGATATtaccaaaaaaaatgaaatcgttGGGACAGTGAAATCGCTTAAAATATACGGACGGGATTTGAAAACCTTAGAACATCCTCCTTTAACTAACACATATGTATTACCGGACAACCCTGGAGAACTCAATGACACTATTATCTTGGCATACCTATATTTGATCAAACAAGCGTTgcttttggaaaataaagaatGTGTTGTTTATGATACCAATTTTTTTTCGCAGCTTAGGTCAGTTTTTTCCCATTCTCCAACAAGTCCAAAGACAACGCAAGACCTCTTAAATCTCTGTCATTCACACTTTAAGAACGTCGACCTGACAAGCGTTGATCACATCGTGTTCCCTATACACAGATCCATCCGTTATAGACATTGGGCTATTGCAGCTGTGGATGTCAATGTCAAAAAGATCACACTGTACGATCCTTTGCATAATGGCGATTTTCAAGAATGTCTGCTGGAAGCTAAAATGATTAAATGTTATCTATCTGCGATTGCAATAGTAAGGggatattgtaatttttttgacgatttgaatatttcaatgGATAATCACCACCCAAAGCAAGACGATGCCGTTAGCTGTggtgttttttgtttaaaatttgttCGAAACAAAATTCTTGGATCATCCTTTGAAGCCGTTCATCGAGCATCAATCATGGATGATATTTTACAAGGCGGTATTAAACATGACCGTAACTTTTGCGAAAAACTGACAATTGACATTGACTTACCCAAACGAAAACAGTGCGAACGTGGCTCTAAATGTACTCTCCGCTTTATTGCAAAAGATGATGCTTTTCTAAGGTACACTTGGAAGAAGGAAACGTCAGAAGGAGAGATCATCACACTTGAAGAAACCAGCAATAAGCTAGTCTTTACTGTTGATCAAAGCAGCGATGGATCATACTTTTGCGAAGTGGAAAGTAGCTTTGGAGACATCATTTGTACAAACACCTGCATCATAACGTCAACAACCTACTCAACCTCTATTGCGTACAGAATATCAGCAGTTGTCCGTGGGTGGAAATTTTCCCGAATCCAAATAAAAGAGGTAGAACAACCAATCCAAAACATCATCCCGTTTGCATTAGAGATTATAAACACACCGACTTCTAAAGAATCACCGGACAAATGCCAGCAAAGGCATCTTATATACCTAAAATCATCGCACAAAGAACGGCTTGAAACAAATTACACATTTCCAGGAATAACCTACTTCGAGGAAAACACTTTGGATGACTTGCTGCAAGAATTAGCCAAACGTCTGCAAACTTCAAACATAAGATACAACTTTTGCACTCCGCAATACATATCAAAAGTACTTTTTCCTGAAATCATCATTAAACTTATCACCGATAGAGAAAACTGTACTTACGAGGAAGCTTCAGCTATAGCGTACGACCAAACCCCTGAAACTAAACGGGAACTGCACACCTCTAGCATCGACATTAACATAATTAAATCTAATGAAACCATTTACCCAGCAACAACACAAAAGAGatcaagaagaaaggaaaaccaAGAAAAGTTATTAAACAGGCAAAATAAACCCATACACAAAAAACGTGACCGTCACAGCTTTCTTTACAGAAAAGAAATAagtggctgctag

Transcript

EGACTEQ4350031307-PA

Protein

Uniprot

Gene family

Uniprot term	Description
Q9SCJ9	Ubiquitin carboxyl-terminal hydrolase 26 OS=Arabidopsis thaliana OX=3702 GN=UBP26 PE=1 SV=3
Q91W36	Ubiquitin carboxyl-terminal hydrolase 3 OS=Mus musculus OX=10090 GN=Usp3 PE=2 SV=1
A2XDG4	Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp. indica OX=39946 GN=UBP26 PE=3 SV=1

Gene family	Subfamily
Ubiquitin Family	DUB\|ULP\|ULP
Ubiquitin Family	DUB\|USP\|USP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan
PF02902	Peptidase_C48	Ulp1 protease family, C-terminal catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR003653	Domain	Ulp1 protease family, C-terminal catalytic domain	Interproscan
IPR018200	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR028889	Domain	Ubiquitin specific protease domain	Interproscan
IPR050164	Family	Ubiquitin carboxyl-terminal hydrolases	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24006	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan