Detailed information of EGACTEQ4350031388-PA in Actinia equina

Genomic Location: WHPX01001398.1:229257...235845
NR annotation: XP_031565000.1, E3 ubiquitin-protein ligase RNF13-like [Actinia tenebrosa]
Species abbreviation AEQUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O43567E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens OX=9606 GN=RNF13 PE=1 SV=1
Q5RCV8E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii OX=9601 GN=RNF13 PE=2 SV=1
Q90972E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus OX=9031 GN=RNF13 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005639 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02225
all species →
PAPA domainFamilyInterproscan
PF17123
all species →
zf-RING_11RING-like zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003137
all species →
DomainPA domainInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR046450
all species →
Homologous_superfamilyPA domain superfamilyInterproscan
IPR051653
all species →
FamilyE3 ubiquitin-protein ligase and sorting receptorInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47168
all species →
RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for EGACTEQ4350031388-PA. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for EGACTEQ4350031388-PA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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