Gene detail

Detailed information of EGACTEQ4350034649-PA in Actinia equina

Genomic Location: WHPX01000667.1:188629...196275
NR annotation: XP_031553707.1, uncharacterized protein LOC116290747 isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350034649-PA

ATGGATCTTTTGAAACCAGGACTCAAAAATCTAGGAAATACGTGTTTTGTAAACTGCATTTTGCAGTGTATTGTGTACAACAAACCTCTCATGACCTTCATCAAAGAACATGCAGTCGAAGGAAAACACGATCATGGAGATGGATTTTGCATTGTCTGTGCCCTCAAAGAACTTGAGCTCAATGTGTGTGGTGGCAATAATGGTATTATTGTCCCTAGTTATATCGTTGACAACTTACAAGTACTCTCTGAGAATTTCATCAAAATGCCTGGTGGATCATTTGATCAGCAAGATGCACATGAGCTGTTTTTGAATATCATGGGAGCTATAAGAAACTTGCACTCAAAAAAAgcAACGTGCAAATCTTTGGTACATGCTTTAGAAGCTTACTTTGCTGCAGATATACTTGATGGtaacaataaattcttttgtgcAAGGTGTGGTCAACTGACAAGAGCGGAGAAAAAACTATCTGTCACAGAATTACCTAAAGTTCTTCCTCTTCATTTAAAGAGATTTTCCATGGGAGGATCTAGAAAAATCAAGACCAAACTGGCCTATCCTGAAACACTACAGTGCAACATGTTTAGTGATGTTTCACAGgAATATGCCAGCAAATATACTCTGAACAGTGTTGTTGTGCACAATGGGGATAGCTGTAATTCTGGCCACTATTCCAGTTTCTGTAAAGTAGACAACATATGGTTTTCTATGAACGATCAACATGTCACTAAAGTGTCAGATGTAGAAGCTCTCAATCAAGAAGCTTACATTTTGTTTTATGTCCTGTCTGATAAGGaagtaaaagaaaagGTGATACAAGTAAATGATACAAGCGGGGAAGACAAAGAAGAAAACCCATTGCCGGGATATCGCATCAAAAATCAAGTGTTCAACGAAGAGGACCTCACGAAATTACGGGATCCTAAAGCCAAGATCAATGACAATAAAATGTCCTTCCTCAACTcccatttttttacaaaactgaaaaaaaaaggttatcaTGCAGTCAGAAGGTGGACCCGAACGATTGATATATTTAGCCTGGAAAAACTTCTGATTCCAGTTTATCAGGATGGCTCACATCCAAGTGCTGGACACTGGTGCCTGGCTGTCATTGACTTCAAGAACAAAAATATCATGTATTATGACTCACTAAAAAATGAGTCAGCATATGAAGAAAATGCTGAATTAAATGTGTTAAGATCATATCTCAAAGAGGAGATGAATGACAAGCTAGGATTACCATTTAATGAAAATGGATGGACATATGTCATTGCTAAAGAAATCCCAAAACAGGACAATGGTACTGACTGTGGTGTATTTGTTTGTCagTATGCTGCTCACATTGTTCAGGGATTGCAGATCTTCGACTTTAAACAGGAAGATATTCCTAATTTGAGACTGCAAATGAGCGATGAACTCAAAACCTTAACTCCAGTTTCACTAATTTCCGAGTGGGCAGAGACTTATGGCGATGGTGGTAGTGAGACTTATAATGATACTGAAATATACCAtagtactgatgatgatgatgatgctcaaAAAACTGATTACTCTACCTGTGCCACTGATGATATAGATAAAGTTGGAGAAACCCTTGATGAGAGTGAAAAGTGCATGCGAAATGCAAGCTCACTGCAGGATCCTGTGGGGAATCAAGATACAGATGGATGGGATGTCAGTGATGCTGCTGATCATGACAGGAATCTGGACTTTGACACTACTAAAGTAGCAGATGAAGGCGATGATGTAAATCCACAAGTATATACAGATGGAACTGTAGGTAGTTATAATAGTTGCGGTAATTATGGTAAAGTGCAACAAGCTGGTGCTGGGTCAAATACTGAAGGTGCAGCTGAAGGTGGTGCCAGTGGAAAACACGTCGATGATAATGAGAAAGAGCCTTTCTATGTAGGAAAAAAGATACACAGTGAACAGGAATTGGAGGAATTAATTAGCACGTACGAAAAATCCCATTTCTGTTCACTGTGGAAATATGATTCCAAAACACTCGAGGCAGCACAAAAGAAAACACCCAAGAAAATTGCTTATGCAAAGCACTCCTTAAAATATGATTATGTGTTCATGAAATGTATTTTTGGGGACAAACCAAAGAGGTCCAGCCAGACGAGGAAAAGAAACACAAAATCATTTAGGCAAGGATGCCCATTTGAGATCTTCATCAAGTTATCCCCTGGTTGTCAAACACTGGAAGTGTCTCGGTTCAAAGAAGAACATAACCATGAACTGATACAAGACGTCTTTGACCATCTTCCAAAGCAGAGAAGTGTAAGCACTGcccataaaaaagaaattgaagaagcAATTCAACTGAAAGCAAATCCGAAACTTCTCCGTGAAAAAGTTGAGAAAACGACAGGAAAAAAAGTGACACTGAAAGATATTTCCAATCtgaaacaaagaacaaaaagtGAACTAAAACAAAATAACTTGGATTCAGTCATTGAATTACTAAAAAACCAAGAGGGCTCTTCTGTGGAAGTCATTattgacgaagaaaaaaatttcaagggCCTCTTGTACATGGACAGGTACATGAAGAACATGTACACTATGTTCCCTGAATTGCTATTAGTTGACGCCACATACAAGCTATTAGATCTTAGAATGCCAGTGTATCTGCTTCTATGTGTGGACGGAAATGGCTTCAGCGAAATAGTGTGCATGTTTTTCTTGGCCGAAGAAACGAAAGACGTAATTGAAGCTGCAGTGAATGCATTTAAAAAGTTCTGTCCGGCTTGGATTAACACTCATGTTGTCATGTCTGACAAGGACTTCACGGAAAGAGAGGCCTTTACAAAGTGTTTCCCCCAAGCATCGTTGAACATATGCTTATTTCACACTCTAAGATCTTTTTCAAGAGAAATTACATGTGAAAAAATGGGCATCACCTCTGGTGAAAGGAATCGTTCCTTGGAAATTTTGACGAAGATGGCCTACTCAAGAACACGTAGCGAGTATGCTAAATACCACCAAGAACTTGATTCGATCAGTAGGTCAGtaagaatatatatagataaGAACTGGACTTCAATTAAGGCACAATGGGTGTCTTGTTTTAAGGACTGTACATTAAATATCGGAGAAACTACAAATAATCGTCTGGAGTCCACATTCAGCAAAATCAAATCTATCTGCAGCAAATGTGCCAACATCCTACAATTTACCCATGAATTCCTTTCTGTCCTTAATATACTGAGAAGTGAAAGAAGCCATCACTATGTTATGTCCATTGTCCGTAAGCCTATCAAGAGTAAGTGCCATCAAGATCTTcaacaatatttaaattttctgaCACCATATGCCTTTAAATACTGTAGAGGAGCAATTCAATCTATCATCAAAAATGCAACCAGTAACAAATGA

Transcript

EGACTEQ4350034649-PA

Protein

Uniprot

Gene family

Uniprot term	Description
Q9FPS4	Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana OX=3702 GN=UBP23 PE=2 SV=2
Q9P0U3	Sentrin-specific protease 1 OS=Homo sapiens OX=9606 GN=SENP1 PE=1 SV=2
Q5RBB1	Sentrin-specific protease 1 OS=Pongo abelii OX=9601 GN=SENP1 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	DUB\|ULP\|ULP
Ubiquitin Family	DUB\|USP\|USP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21599	ZSWIM3_N	Zinc finger SWIM domain-containing protein 3, N-terminal	Domain	Interproscan
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan
PF21056	ZSWIM1-3_RNaseH-like	Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain	Domain	Interproscan
PF02902	Peptidase_C48	Ulp1 protease family, C-terminal catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048325	Domain	ZSWIM3, N-terminal domain	Interproscan
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR048324	Domain	ZSWIM1/3, RNaseH-like domain	Interproscan
IPR003653	Domain	Ulp1 protease family, C-terminal catalytic domain	Interproscan
IPR052579	Family	Zinc finger SWIM domain-containing protein	Interproscan
IPR018200	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR028889	Domain	Ubiquitin specific protease domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31569	SWIM-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan