Detailed information of EGACTEQ4350035355-PA in Actinia equina

Genomic Location: WHPX01000312.1:47482...60835
NR annotation: XP_031575150.1, uncharacterized protein LOC116308799 isoform X2 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9GV77Extracellular matrix protein 3 OS=Lytechinus variegatus OX=7654 GN=ECM3 PE=1 SV=1
Q5SZK8FRAS1-related extracellular matrix protein 2 OS=Homo sapiens OX=9606 GN=FREM2 PE=1 SV=3
Q6NVD0FRAS1-related extracellular matrix protein 2 OS=Mus musculus OX=10090 GN=Frem2 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyRHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19309Frem_NFrem protein N-terminal domainDomainInterproscan
PF16179RHD_dimerRel homology dimerisation domainDomainInterproscan
PF16184Cadherin_3Cadherin-likeDomainInterproscan
PF00554RHD_DNA_bindRel homology DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045658DomainFRAS1-related extracellular matrix protein, N-terminal domainInterproscan
IPR002909DomainIPT domainInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR037059Homologous_superfamilyRel homology domain (RHD), DNA-binding domain superfamilyInterproscan
IPR008366FamilyNuclear factor of activated T cells (NFAT)Interproscan
IPR011539DomainRel homology domain, DNA-binding domainInterproscan
IPR032397DomainRel homology dimerisation domainInterproscan
IPR039005RepeatCSPG repeatInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12533NFATInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan

TOP