Gene detail

Detailed information of EGACTEQ4350036732-PA in Actinia equina

Genomic Location: WHPX01000504.1:358930...368982
NR annotation: XP_031560839.1, uncharacterized protein LOC116296873 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

EGACTEQ4350036732-PA

GTCCTCCCCCTTCAAGAGTTTCATTTCTTGCCCAGGCGCGCTCTTACTTGCCTACACACgcgtgggattcctgtggtaagcagttcaagatggcggcttccATGCATTGGTGaagcaaaatacaaaaatacaaggCGTTTTATAACAAAAGTTCTAGGTTTTTTCCTTCAAGGAATTCATTCCGTTTTCTAATTTTCGAAGTAAGCAAACCTTCGTAATGcgaaacagaaaagaaaaatgtttagcAACGCGCAGATAAAAGAGCATGGTGAGCTGCTGAATAACCGGTGAATAAGAGCCGGGATTAGAGCATGGATGGAGAAAATTCTTCCAAGTTTGTTAGAGGTCTAAAACATTTAAACTACCAAAGGAGCAGCGGTTTGTTGTGCTTGTTAGACGAGGAGAAAAttcaagaagaagagaaaaatccTGGGGTTGaagtaaaacaaaatggcgtcgaAGATTTCGAGGTTAAAGCTAAAGAAAACGGAATCAGATTACAAGGCAGTACAAATGGTGGCCAATTTGAACAAATAAGTTCCGCTGGTACAGGGCTTTTCGATGAAGTGTCCAAAGCCTTTAAGAAAAAACGCAGCATAGCTAACAAATGTAAGGTTTATGTGGGGAATATTGGTTATAAGGTGAGGAGTAGAGAGTTTAAAGAATTCTTCAGTGCGTTTGGAAGAGTGTTGCAGGCACAGATAGTACAAGACCGTATCAAGAAGAGATCTCGAGGATTTGGATTTGTCACATACAGTAATGAATATGAAGCTCAGAAAGCCAAGCAATCGGCAGATGAAGAGCGTATGTTACATGACAGGTATATacaaataatagttattttctctcttttaaaactaaatgtttttcttgtagaattttatttaaaaaatttttttaaatcttaattagAGTTATGACTGTAATGACTCCCACCAGAAAGAGAAAAGGTGGACCAGTTAGTAAAGAACAATCTCTAGAGGAAGCTCTTGAAGAATTCCAAAGCTTATCACTCTTAGAAGAAAAAGAATCGAATGAAAACCTGGACagtgaaaaGGGTCAACTATCCATATCAGATTTGAATGATGACATCTTGATCCTAATATTTTCTTATCTGGAACTGAAAGACAAAATACGCATTGAAAGAGTTTGTACAAGATGGAAGTGCCTTCTTCTCAAAGTTTGGCCATCAGTAACACACTTAGATTTCAAAAACTTATTTTCTCTCTACAAAGGAGGTCTAACAGATGACATTCTGCTGGGAATATTTCGTCGAGGTTGTAAGAATCTTACTTCACTTGATCTTTCAGCATCTCCATTTCTTTTAACAGAGTTTGCAGTTCATTGTATTGCCAAACACTGCAAACACCTTAGAGAAATAAACATAACAGGAGTAGAAGTATCAACTTCATCCCTCAAGACCTTGTCAAAAGAATGCAGTAAGTTGGAGAAATTAGTTCTGCGTAGGTGTTACCAGGCTGGTGAAAAAGGattctGGTGGATATTGAAGCAGTGTACAAATCTAAAGCATATTGACATCTCAGATAATAAAAGGCTTTCTGGGAAGtgtttttatatGCTGTCAGACACTGTAGAGAGTCTTATTCTAAGTCACTGCAGCAGGCTGACTGATAGCAGTGGTGCATTTATTGGTACAAGGTGTAAAAACcttaaatatattgatatatctGAGTGTTTGTCTCTGACAGATACTGGTGTGAGAGATATAATTCAGGGCTGTCCCAAGATTGAagagttttattttaaaaagtgtCCTAAAACAGTGACAACCCATGGACTCTCTGTATTATCACGACTAAATCacttgGTTGTGCTGGATCTTTCACTctgtgatgctgttgatgatcaGATTCTTCTACTGCTGGGCCAATCATCTATCCACTTGAAGTCACTAAACATCGAGGGGTGTTTTGGTAGCATCACTGATACTGGATTGCAAGCTCTTATCACATGTCACACACTGGAAACACTCAACATCAGCTATGTCGATGAGgTCACTGATGTAAGTATCAGTCAGCTGGCCCGTAATGGCTCCATACAGACGTTTGTTGCACGAGCATGTTCAGGCTTGACAGATGATGTTGTCAGGAGTCTCCTTTGTCACTGTATCAATCTAACAACCCTGGACATGAGTGGATCCATCAATATCACTGACACATCTCTAAACCACGTGACTGAATACTATACCTCATCACAAAGACCTGTACTGACATTTATCATTGGAGGTACCCAGATAACCGAAAAAGGCGTGTCAGACACGTGTAGTCGTTGTCATAACAACTGTAAAATAGATACATTCGACCTGTCTAGCGAATCATTGCGATTCGGAAACCCAAGACTCCAGTCAATAGCTCCTTTCCTTGAAGAAAGTGACGAAGATGATAACgatagtgatggtgaagatgaggACAACCATATCGAACAGATCAATTACGAGATGGGGAATGATGTATATCAAGACTTCCTAGAGGCTGATGACCCCGCCCTTATGATGGACGAGGAGTACTGGATGTTTGATCACGATTAGATTTCATGGAGACAGTTTTGATATTTACACGATTGCGCCTCTATGATGTCAAACTCCCACTAATGGTTTTCAGTAAAATTATACCTCTTATTAAGCGATGCGGCAACCTTTTTGGCGGGCGTATGAATAAACAGTTGACAATTTTCGAGGGTGGTAGCGTATTTTGCAGACGTTCTTTGTTTCGGTCGCTCGGCTAAAGGGTAGCCGATTTATAAAAGTTCTACAGTCtcataaataataattgaaataagatatccacgtatattttgtttatatatttgtttgcttCAATAAAAATGTGAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00646	F-box	F-box domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001810	Domain	F-box domain	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR006553	Repeat	Leucine-rich repeat, cysteine-containing subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13318	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0019005	Cellular Component	SCF ubiquitin ligase complex	Interproscan
GO:0031146	Biological Process	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Interproscan