Gene detail

Detailed information of EGACTEQ4350037100-PA in Actinia equina

Genomic Location: WHPX01001395.1:270457...276475
NR annotation: XP_031550430.1, leucine-rich repeat-containing protein 27-like isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350037100-PA

ATGGCGGTCGGCGAAGAAAGTGGTCTAAAACGCGTTGAGCAGCTTATAAAGACAGCTATAGCTTTAGGAAACACAACAATTGACTTAGGAAGTAAAAATCTTACAAAAATCCCATCTGAGATTCTAGACTTGCCGCAATTGGAGTTTCTGTATTTGGAGGGAAACAAAATAACGGCTTTTCCTGAAGGATTCTTTGAGAATCTACCTAATCTAAAATGGTTGGACCTGAGAAATAATCGTATCAGTGAAATACCAACTTCAGTAGGATCACACAGATGTCTAAGGAATCTTCTTCTTGAAGGAAACGAAATTAAAGAACTTCCTCTAGAGCTAGGGTTTGCTAAATGTTTAAGTGGCTTAAATCTGACATCGAATCCCTTGGAGATGCCTCCCTCGCAAGTTCTAGAGAGAGGAACACAGGAAGTATTAAAGTTTCTTAGAGAAAAGTACGCAGAAAAAGTGGGTCTTAATGGCCAGGAAAGTTTCTTGAAAGAAGTGTCGCAGTCCTCAAGTGAAGAAGATTTGGGCTATGGCAGCAGAGATTATCAAAttGCCATTGTCCCTGATGAAGAAAAAGAGCTGGTTAAAGATGAAGGGGTGAAGGTTGAAAGGGTCAAACTGCCACCGATATTCCAGGCAGCAGCAGAAAGATCACGGAATAGAACTTTCCACGAAAATGAGAATGTACTGAGAGGACTAAAGTCCAAGCAATTTGAGCCCAATACaactaaaaataattttcaagttAGTGAACCAGAGGTTAGTTTAAAATCTCCTAAGAGACAGAGGAAGGAGATACCAAGAGGAAATTCACCACAGAAAGAATTATCTGCATCACTGGAtgagaggaaaagaaaggacaattTCAGTGGTGCGAGGAGTAAAAAACATAGTGACTCTAGCATGAAGCAAAGCTTAGAGTCACAGAAATCGGAACGAAAAGCTGAGCATGGTGCAAAACCAAGTGTACATGCTAAGCATGCTAAGAGAAGAAAGTCACAAGGACAAAGCCCCACTAAGAATACTGAAcagaatttcaaaacaaaagataGCAAGCCACATCATTTAGCATTGAGCCATGATACTCAAGCTGTAAATCATAAGCTATCTCATCGCAAGCCAGACGATCCATTTATTGAGACACAAAACGGCAGTGATAGAgacaatacaataaaaaaaatcactatAAGAACCAGTGACATGAATGTGGATGAGAGAATTGCCATGCCACAAAATTATCAAGAGACAAGCAAAAAAATTCATCCTGGTGAAATAGAAAGTGCAATACATGCTCCGTTCTCGTTAAACCTAAATGAAGGTGATTTCATAGCAATCCAAGTGCCCGACAAGCTCTACATAAAGGGGCAGCCATGCTTGGGCAAGATAACCTCCACAGCTGACAGACTTGGATTATTGACAGTCCACTACTACACAGGGATATATGATGGGTGCTGGCGACCTATGATGAGTAGGACAAGCCCTTATCTGAGAAAAGTTCCCGAGGCTAGCGTGCTGTGTAAATTCAAATTATCTAGGGATGGCAGGATGAGTCCTATCACTAGGAACCGACCTTCTCCCTCACCCATCAAAAATAAACAACTTAGTGGTAAAGAGCATTCATCTTGGTCACTaccaagaagaaaaacaagcacTGAAACAGCTGATCCAGATCTCAGACCAACACACACCCCGGTGTCATTTCATCGTCCTCCTTCTAGGCCAGACCAAATACGCATGCAGTATGATAGGCAAAGAGCTTATCAGCATTCTGCTGAGCGTGAAAGGCGTCACTCTTGGAGCAAGGAAAGAAACATCAAAGAAATGTCAAATAGTCCTGCAAATGGCCCAAGAAGACTTTCACGGCCAACAATGCAAAAGAAACAAAGTCCAGCATTCGACCGGTACAATGCAAGTGCATCACCAAGATTTCCAGATTATGAAGCAAAAATTGCTGAGCATCAACAGATGGCCATCACTGCTATTCtgaatgaaaaagaagactctgtcttacaaaaattaaaAGATAAGAAGGCACTGAGTGATTGGCGTGACAAGACAAGAAGaataaaacagcaaaaacaacagtTAGCTACATTAAAGAATCCACTAAAAGttgATGTTAATGCACCTTATGGTACAGAAAATAACATGAAAGAAGAAAAGCCAAACTCAAAATATGTAGCAAAGCTGAAAGAGATACTGGACGATAAAGACAAAGATGCATTAAGAACAGCCTTGAATGATCATAAGCTGGAGGGTAGAATAAAAGTACACATGGAAAAGATACAGCAACACCGTACTAAAACATATGAAGACATTGCAGATCAACTTGCTTCAGCAAGACGAAATCTTGAACTGgcTCAAAATTTTCAGAAGGAACTGGatgaaaaaaaagctttagaGTATCGGCTACGAGCATATACAGGAGAAGAAATAGCTCTTGCTAAAGGACAAATAGTAAAGAAGAACTAA

Transcript

EGACTEQ4350037100-PA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR050715	Family	Leucine-rich repeat and signaling effector domain-containing protein	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45752	LEUCINE-RICH REPEAT-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan