Gene detail

Detailed information of EGACTEQ4350037570-PA in Actinia equina

Genomic Location: WHPX01000359.1:434656...443142
NR annotation: XP_031553899.1, spindle assembly abnormal protein 6 homolog isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

EGACTEQ4350037570-PA

CTTGAAGATTCAGTCAACATTTTGAGAAGAAACGATGGAAGAATTCTTCAATAAGAGCGTTCCTCTCTTCCTAAAACACTCCGACCACGACGACAgAAGAACTCGAGTTCGCATCACTGTTGTCAACAGACTCGCTTCCTCTGGACCTCAAAAGGAACTTGCTGTACGGCTCACTGATGATGGagatcctttctttctttattcactGATTTTGACTGAAGAAGATTTCCAAAGCCTCAAGAACCAGCAAGGATTATTGGTTGACTTTGGCTCATTTCCTCAGAAGTTTGTGGATCTCCTTGAACTGTGcctaaaagaagaaaacaaggacATGCCAAAGTTTCTTTTGCAGTTTGTATCATCGGCAGGATCCTATGAAAGAGGTGTTGGGAATCTGAATGTTATTGAAACCAACCCCTTTAAGCACTTGACTCATTTGTCATTGAGATTCTTAGCAGGGAATGACACTGAAATCAAGAAATACCTGGCAGATTGCTTAAAGAAAATCAAGGAGGAAAAATTATCATTGGAGAATAGGTTATCCAGTACAGAACAGGACCTTAGGCAACGATTAGAATCCTGTCAAGAGGTTCTTAATTCCAAGTCAAAGCAGCTTGATACACTCCAAGCTGAGTTTTCTGCTAAATCCAATGAGCTGTCGAATAAGTACGCCCAGGAACtaacagaagaaaaacaaagaattttacaGATGAAGAGCCAAACAATGCAAGAATttgaaagggaaagaaaaaatctAGAGCAGTCACACAGGAAAGTTGTCAAGGGTATGGAAAATCGCATTGCTGAAATCGAAGGACAAAATAAGGATCTTACAGACAAGAAGTATCGAGCTGAAGCCAAGATCCGTGAACTAAGTACAAAACTATCAGGTCTTGAGGGGGAATACAGCCATATGAAGGAGGAACTAATGACCCTGAGGCGTGGCAACTCTGTTCTGAATGCCGAGCAGCATGAGAATGATAAAACATTAGCTCATCTGCGCACAAGGGTGGCTGTACTGGAACAAGAACTGAGAGACAAAGAACAGGTAATATCAAGAACAAATGAGCTGCTGCAAGCTGCtaatgaacaaaaacaaaaccaggAAAATGTACTAGAGCAGCgacaaaaacaaattcaaaaactGGAAAACACAGTTCAATCAGTATCTGCTGAAGTTGTCAAGGGTAATGACATAATTCAGCGTCTACAGTCTGAGCGACGCACAGTAAAATCTCAGATGAAAATGAAGAGTGTTCTGGTAACTCAACAAGAGAAAGTTCTCAGTGAAAAGGTAAAGGAACTCCAGTCCCTACAAAAAGAGTGTGAAACATTGAAAGAAAGTCAAACGTCCAAGGAAGAAGAGATAAAAAAGCTTGGTGAAACTTTGAAGGCAACAACGGAAAAGTTAGAAGAAAGTAAAGAACTATTAAAAACCAATGAAAATGtgataaatTATCTAAACAAGCAGATGAATGATCAGATGATTACCAGCCAACAACGACATGGGGCATTTGAGCTTCACTCGTCTAAAGATCCTCTGCTGTCTAAAGACGTAATAAATATAAGTAAGACAATAACTCCGCCACAAGCGCTTGTCCCTCGGTACAGCAACCAACAGGTTACATACCGTCCAGCTGCTCAGCGCAAAGCTACATTCCCTCGTCCTCTTACCCATTCCACCCCAACAATCCCAGAAGAAGCTGAGCCAAGGGGACCAGAAGCCACACCCATCACCACACCACACTCaagaaataacaatgaaaatcaACCAGTACTAGACCCTAAGTACCTCCAACGAAGGAACCATATAAACGAGGTCCCAGGCAAGCATAACGATAACGTTCATCATGAAAAGAGAATTCTGCAACCGAGTGTGCGGTTTGGATCCAATGCGCGCCCCAGTGCCGCACAACCGCCTCTCATGTCTGCCTATTTTCCAAAGAATACGTAGTTAAAGCAATAAGGGTTGGTGGGATGAAACAAAAGGGATATCGtgtaaataaatatacttaATAAATATATGTCAAAAAGCTTATATTTCTGTGCCTTATTTTTTGGTATGAGCGAGAAATAAGAATTGCTataactttgaaatggcttccatgaTCGAACATTGTGAttgattaaaattc

Protein

Uniprot

Uniprot term	Description
Q80UK7	Spindle assembly abnormal protein 6 homolog OS=Mus musculus OX=10090 GN=Sass6 PE=2 SV=2
Q6UVJ0	Spindle assembly abnormal protein 6 homolog OS=Homo sapiens OX=9606 GN=SASS6 PE=1 SV=1
Q5ZMV2	Spindle assembly abnormal protein 6 homolog OS=Gallus gallus OX=9031 GN=SASS6 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16531	SAS-6_N	Centriolar protein SAS N-terminal	Domain	Interproscan
PF18594	Sas6_CC	Sas6/XLF/XRCC4 coiled-coil domain	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032396	Domain	Spindle assembly abnormal protein 6, N-terminal	Interproscan
IPR038558	Homologous_superfamily	SAS-6, N-terminal domain superfamily	Interproscan
IPR041513	Domain	SAS-6 coiled-coil domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44281	SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005813	Cellular Component	centrosome	Interproscan
GO:0005814	Cellular Component	centriole	Interproscan
GO:0007099	Biological Process	centriole replication	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16487	SAS-6, SASS6; spindle assembly abnormal protein 6	-	Chromosome and associated proteins	ko03036	deepkoala