Gene detail

Detailed information of EGACTEQ4350037796-PA in Actinia equina

Genomic Location: WHPX01001169.1:157720...165740
NR annotation: XP_031574518.1, uncharacterized protein LOC116308270 isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q05048	Cleavage stimulation factor subunit 1 OS=Homo sapiens OX=9606 GN=CSTF1 PE=1 SV=1
Q99LC2	Cleavage stimulation factor subunit 1 OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=1
Q5R8K2	Cleavage stimulation factor subunit 1 OS=Pongo abelii OX=9601 GN=CSTF1 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	CUT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16699	CSTF1_dimer	Cleavage stimulation factor subunit 1, dimerisation domain	Domain	Interproscan
PF02376	CUT	CUT domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038184	Homologous_superfamily	CSTF1, dimerization domain superfamily	Interproscan
IPR003350	Domain	CUT domain	Interproscan
IPR032028	Domain	Cleavage stimulation factor subunit 1, dimerisation domain	Interproscan
IPR051649	Family	CUT Homeobox Domain-Containing Protein	Interproscan
IPR010982	Homologous_superfamily	Lambda repressor-like, DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14057	TRANSCRIPTION FACTOR ONECUT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan