Gene detail

Detailed information of EGACTEQ4350038162-PA in Actinia equina

Genomic Location: WHPX01001291.1:48197...50221
NR annotation: XP_031552545.1, uncharacterized protein LOC116289746 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350038162-PA

ATGGACAGGTACATGAAGAACATGTACGCTATGTTCCCTGAATTGCTATTAGTTGACGCCACATACAAGCTATTAGATCTTAGAATGCCAGTGTATCTGCTTCTATGTGTGGACGGAAATGGCTTCAGCGAAATAGTGTGCATGTTTTTCTTGGCCGAAGAAACGAAAGACGTAATTGAAGCTGCAGTGAATGCATTTAAGAAGTTCTGTCCGGGTTGGATTAACACTCATGTTGTCATGTCTGACAAGGACTTCACGGAAAGAGAGGCCTTTACAAAGTGTTTCCCCCAAGCATCGTTGAACATATGCTTATTTCACACTCTAAGATCTTTTTCAAGAGAAATTACATGTGAAAAAATGGGCATCACCTCTGGTGATAGGAATCGTTCCTTGGAAATTTTGACGAAGATGGCCTACTCAAGAACACGTAGCGAGTATGCTAAATACCACCAAGAACTTGATTCGATCAGTAGGTCAGtaagaatatatatagataaGAACTGGACTCCAATTAAGGCACAATGGGTGTCTTGTTTTAAGGACTGTACATTAAATATCGGAGAAACTACAAATAATCGTCTGGAGTCCACATTCAGCAAAATCAAATCTGTCTGCAGCAAATATGCCAGCATCCTACAATTTACCCATGAATTCCTTTCTGTCATTAATGTACTGAGAAGTGAAAGAAGCCATCACTATGTTATGTCCATTGTCCGTAAGCCTATCAAGAGTAAGTGCCATCAAGATCTTcaacaatatttaaattttctgaCACCATATGCCTTTAAATATGTAGAGGAGCAATTCAATCTATCATCAAAAATGCAACCAGTAACAAATGACACAGTACAAAAGACATTTTCATTCAGCTCTTCGAGATCATTtaacaacaatgataattttacaacaacaaGTTCCTCATGTACATGTcccttccaaaacaaaatggccctTCCTTGCAAACATATCTTTAAGGTGAGAAATATTCTTAACTTGTCTTCATTTGAGCCAAGAACTGTTCATCAACGGTGGACAATGACTTATTACAGAACACTTCGAGAAATACGCTTCTCAAAATCCATATGCGATACCATTACGGTAAATGAAGTCACACTGCCGTCAAACagtgacaaaagaaaaataatgacgCAGgcgcaaaaatttaaaaaaggactACAACTGGGTCAACAATTGGCATCTTTAATAAGTGAAGGAGGAATGGCCACATACTTAGAAAGAGAAAGCGTTTTAAAAACTATCATTGAACAGTGGAAAATAGGGAAAAAAGTGGAATTGTGTGTCccgaaaaatgaaaatagaacCGATGATCAAACAGTCCAAAATGAAGAAATTGCAACTGTTGTTGCAAATGATTTTGTTATTAAAGgaggtaatgataaaaatattgaagGTGTTGATGACAGTGAAGAAATTGCAGCAAAAAGTAATCCCTCTATGTTTGAAGAACTGAAAGTAAATGATGAAGATGTTAGAACATATTATATAATGCCACCCAGAATGATGAAAAGAGGGCGTCCTAAAGGTGCTGAACTAACTGTCATTGGGcttccaaaaaagaagaaaaagattaagGAACAAAGAATGCTACCTTTCTCCAAACTACAACCGAAAGAAAAAGACCGCATCATCCTAGAATGCCTTACAAACTCCCTGTCAGCAGCTGAAGCTCTAAGTGGAAAACGGCTTTTAATTAAATCTGATCTTCAATATAACATCCAAGAAATTCCAGACACCATTAAAGACCAAGAGACTATTGATATCTACAGAGCAGAAAAGTATTTTCAGAAAGATACATGGGTGGATGTTCTTGGCATCTTACACAGAAAGGAAAGTCAGAAATTTTGTTGCACTGTCTGCTGCAAGGTGATATCAGATGAGTCCCAAAAGAGCATTGCCTGTGAGCGATGCCTGACATGGTTTCACTTTTCTTGCACTTCACTTAACAAAGCACCAAAGATGCGAAATTGGTTTTGCAACTCATGCAAAATGAAATACCAAACCTGA

Transcript

EGACTEQ4350038162-PA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21056	ZSWIM1-3_RNaseH-like	Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain	Domain	Interproscan
PF00628	PHD	PHD-finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048324	Domain	ZSWIM1/3, RNaseH-like domain	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR019786	Conserved_site	Zinc finger, PHD-type, conserved site	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR007527	Domain	Zinc finger, SWIM-type	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR052579	Family	Zinc finger SWIM domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31569	SWIM-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan