Gene detail

Detailed information of EGACTEQ4350039381-PA in Actinia equina

Genomic Location: WHPX01000941.1:314082...318477
NR annotation: XP_031571965.1, beta-1,4-N-acetylgalactosaminyltransferase 3-like isoform X2 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350039381-PA

ATGTCTAACTGGGCATTCTTGACTTCGCTTCATAAAAAGATCATGTTTCTTATAATTCTGTCCTTAATTGTAGTGATTTTTCAACtctttcattttcaaaacaGTTTAACTGTCCAATGGCAAAGAAGAGAGGGTCGAGCAGCTAATTATGTTCCAGAAACCCTCGCAAGATATTTTGAAGGTTCTGGTGGAGcgttggaaaaaagaaaagacatgaGAAAGATGGATTCAATTGGAATGAGAATTCAAGAAATGAAAGTTGTAGGTAAATATAGATTTGCCGGTAATAAAGATGATGGGAGAGtcgatttaaaaaatacaaatgacGTATTTAGATTTCATGATAACAACAAGCTTGAAAAAGCCCAAAAGGATTTCAACGAATCCTCAAGTATGGAGCAACAGTCGAAAGGTGAGAAAAAAGTTGAggtaaaaactgaaaaatttcaTGCAAGTAAAAATAACACCAAGCTTGGAAAGGCCCAAAAGGATTTCAACGAATCCTCAAGCATGGAGCAACAGTCGAAAGTTGTGAAAAAAGTTGAAGTAAATATTGAAGAATCCGAGAGACCAACAAAATTTACTACAAACTTGAACACCCAGAAGCTTAAGAAAATTTCACATTTTGGATTTCTGAATTTGCACATCTGGGATAGTGTTTGTGGAGATAAAGTTCGGAGCTTGAAGGAGTTTATACTTTTTCCAAGTGCGCCGAGGTTTAGATTTATGATCAACAAGTTTGAAACCAAAGGAACAAATATGAACGATTTGGGAGTACGAATGTTTGGTTTCCTTCATCCAAATGAATCTGGCACTTACAAGTTTGGAATTGCGTCTGCAGGAAATTCAGAATTATGGATAAGTACTGATGCAAAACCGAGAAATAATAAGTTTATGGCGTTTGTGGGTCCTGAGAAAGAAAGGCATACGAATTACTCAGGAAACTTAAAGAAATTTCCAAGTCAAATTTCCAAGTCGGTAACTCTACAAAaagatggaaaatattttgtagaAGTCATTTATAAGCATGCCACGGGTTCGTATGGTGTCGAAGTTGCCTGGATGAAGCCAGGAACTTCAGATTTTCAGATTATTTCTGGAAGTTACTTGTCCTTAGCTGTGAACGACAGCCATATTCCTAACAACACTGTAACTGCGACAGATTAtactgaaaggaaaagaaaagtcaATATACAAGGAATCAACCAAATGCTTTTTATGGATTTCATAGACTTTGAAGATGCCTTCCCTGAATGCGAATATGAACCAAGTTATTACATAAAAGAGAAATTGGTGAGATTTCAGGGAGCTCGAAACGAAAGTAATACTCACTTTACTGAGATTTACCCGCCTGACAAAACCAACGAAACTCTTCCTATGGTGATGAACGATGACATATGGTGGATTGAAAACAACTATGGTAATGACTTCATCGATAATGAGACCGCGATGCATATCGGGAAAATTTTTACCAAAACTTTGGAGGACAAGTACAATGGAACTTTTAAAGTGGTTAAATTGATGACAATGGAGAGAGTGATCGACAAAGTCAAAGGGAATCGATATCACATTCAAATAGAGATCGAAGATTTGTACAGCAAAAGACATTTCGAGTTCTCCGAGTTTCTTTATCAGCCAAGAGACgcgggctacctgtgctttcCTCGTGGTTTTCGTTGGAGCAAGTATGCAACTGTGAATGTAATTGTGCCTCTGAAAAACAGTGGTCGGTGGGCTTTGCACTTCATCAAGAATATTGCAGATATCATATACCAAACACGTGACCCTCATATCCACGTGGTCATCATTGATTACGAAAGCACCGACATCGACGTCGAAGCTATTTTGAAGAAAAGTTCTCTCAGTCGGTATACAGTCGTAAAGTTGCCTGGCAACAAGAAATTCAACAGAGCAGAAGCTTTGCAGAAGGGGGCTGATGCAGTCAAGGATCCTCATAGCATTCTGTTCCTTTGTGATTTAAATCTTAAAATTCCCGCCAAACTGATCGAAACGATCCGCAAGCATTGCGTAGAAGGCAAGATGGCATTCGCTCCAGTAGTAAAGCGTCTCAAATGCGGATTTTATCCTGAACTACCATTTGGTTACTGGGAGACGCTTGGATTTGGTCTCTTCGCGTTATTCAAGTCAGATTTTGACCGGGTCGGAGGAATGAATGTCAGAGAATTCAAAAACTGGGGCGGGGAAGACTGGGAACTACTTGATCGTGTCTTAGAGTCCCGGATCGAGGTAGAAAGGCTGAAAATCCcttctttttatcatttttatcatcctGGGAATAGTCGGATTGGTGTCTGA

Transcript

EGACTEQ4350039381-PA

Protein

Uniprot

Uniprot term	Description
Q6L9W6	Beta-1,4-N-acetylgalactosaminyltransferase 3 OS=Homo sapiens OX=9606 GN=B4GALNT3 PE=1 SV=2
Q6L8S8	Beta-1,4-N-acetylgalactosaminyltransferase 3 OS=Mus musculus OX=10090 GN=B4galnt3 PE=2 SV=1
Q766D5	N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 OS=Mus musculus OX=10090 GN=B4galnt4 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05679	CHGN	Chondroitin N-acetylgalactosaminyltransferase	Family	Interproscan
PF07691	PA14	PA14 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037524	Domain	PA14/GLEYA domain	Interproscan
IPR008428	Family	Chondroitin N-acetylgalactosaminyltransferase	Interproscan
IPR051227	Family	Chondroitin sulfate glycosyltransferase	Interproscan
IPR029044	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR011658	Domain	PA14 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12369	CHONDROITIN SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008376	Molecular Function	acetylgalactosaminyltransferase activity	Interproscan
GO:0032580	Cellular Component	Golgi cisterna membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09657	B4GALNT4; beta-1,4-N-acetylgalactosaminyltransferase 4	EC:2.4.1.244	Glycosyltransferases	ko01003	deepkoala