Detailed information of EGACTEQ4350039780-PC in Actinia equina

Genomic Location: WHPX01000339.1:297835...305453
NR annotation: XP_031566766.1, tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7ZWS1tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Xenopus laevis OX=8355 GN=dus3l PE=2 SV=1
Q28BT8tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Xenopus tropicalis OX=8364 GN=dus3l PE=2 SV=2
Q91XI1tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Mus musculus OX=10090 GN=Dus3l PE=1 SV=1
Gene familySubfamily
Transcription Factors Familyzf-CCCH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01207DusDihydrouridine synthase (Dus)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018517Conserved_sitetRNA-dihydrouridine synthase, conserved siteInterproscan
IPR035587DomainDUS-like, FMN-binding domainInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45846TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0017150Molecular FunctiontRNA dihydrouridine synthase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05544DUS3; tRNA-dihydrouridine synthase 3EC:1.3.1.89
Transfer RNA biogenesisko03016deepkoala

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