Gene detail

Detailed information of EGACTEQ4350040691-PA in Actinia equina

Genomic Location: WHPX01001051.1:89553...97575
NR annotation: XP_031563946.1, E3 ubiquitin-protein ligase TRIM71-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350040691-PA

ATGGCAATTAATTCCCATGAACACGTACAACAACCCAAGAGTTCTGCCCTGTTTGCATTCATTTGTCTCGGGTGCTTGGACAAAAGTATAAGGTCACAGGACAGGAAATTGCTTTGCCCAACATGCAACCAATCAGTGCCCGTTCCCGCAAAAGGAGTCGAGACGTTCCCCATCAATTTTTTCATTGACAACATGTTGACAGTCCTGGCCGTACAAAACCCAACAAAATGCACCAACTGTGAAGATAGTGCCCAGGCTACAGAGCGCTGCCTGGATTGCGTGGAAAACCTCTGTAACAACTGCGTGCATGCTCACAAGAGAATCCGCCAGACAAAAGACCACAGGATTCTTACTTTTGAGGAGATTTTGGCCAATGAAGTCAGAGAGACGATTAAATGTCCGTCGTTTTGTGGAATGCACCCAAGAGAGgTACTGAAGTACTTCTGTGAGACATGTGACGAGGCAATCTGTCGTGACTGCGCGATCTACGAACACAGAGATCACATCTATGTTGACTTGAAAGAAGCTGTCAAACGCTACAGATCCACTATCACCAACATGTTGGACAACAGCAAGAGGAAAATACCCGTTGTtagGATTGCAGTTGATGAGGTGAAGGAGGTGCGACAGAATCTAAACGAGCGGGTGGAAACAGTCAAGAGAAGCATCCATGAAACAATACAAGGACATATCAAAGCACTGGAAGAACAAGAAGCGGATTTGATTAACACGCTGGAGAAGATCTaccaaagaaaggaaaagGTTTTGACAAATCAACAAGAAATTCTCGAACTTGATCTTTCTAACCTTCTCAGCAGCAGTGACTTTACAGAAAATGTTCTCAGGTATGGAAACGAGGCTGAAGTCATGCTTGTGAAGCCGCAGATTGTCAGCAGACTCACTCAACTCAACGACCACGAATCACAAACCGAACCTGAAGATAACGATATAGTTTACTTCACATCAAATGACGCAGCTCTTTCCAAGGTCATTTTAAGGCTCGGTAAAGTAACGACAAGCTCAGCATTCCCTCTACTGACATGCGCAGAAGGCCCAGGGCTGGTTAGCGCCAAGGTTGGATATGTTGCTAAGTTCACTGTTTTGGCCAAGGATCGAAGTGGAGAGGCCTGTACATCAGGTAACGATCCAATATCGGTTAAAATACGTTGTCCATCTGGCTCCCCCTTGATTGCGGATGTTGTGGATAATGAGGACGGCACCTATACTGTCTCTTTTACTCCATGTATGAAGGGAGACCACGAAGTTAACGTTACACTCAGAGGCAAACACATCCAGGGAAGCCCCTTTGATCTGCAGGTGACTGCTGGAATCGACTGTGAGAAGATCTCTTCACCAGTCCTAACCCTGACTCCAGCTGGAGAGGATTCCAATTCATCTGATGAAACCCATGAGCCATGGGGCGTCGCAATCAATCCAAAGGGTCAGCTGGTTGTGACAGATCATCATAACCACTCCATTCAGATTTATGATGCTAATGGCCAAATGGTGTTTAAGTTTGGCATCCGCGGTAAGGGAGACGGGGAGGTCTGGTACCCAGCGGGAGTGGCGGTTGACAAAGGAGGCAACATCTTTGTATCAGATCATGGTAACAACAGGATACAGGTATTTACACAAGAAGGAGAACTCATTCGTAAGTTTGGCAGCAAAGGAACAGGTTCTGGTCAACTCAAAGGTCCATGTGGGGTCGCGGTGGATTCCAATGACCGCGTCATTGTCGCAGATCGCGACAACCACCGAATAAACGTCTTTGACGTCGATGGAAATCCGATTTTCCGCTTCGGCAGTTACGGAGATGCCGACGGAAAGTTCAACTGCCCTCGGCACATCTCGGTTACTCCAAAAGGGGAGATTCTTGTCTCCGACGCTGGTAATTTCCGTATTCAGGTCTTTGATAGCCAAGGTAATTTTCTATACAAGTTTGGAGAAAAAGGCACCAATGATGGTCAGTTCAGCTGCCCTGCTGGTATCTCCACGGATTCTGAAGGCCATGTTGCTGTAGCAGATTTAAAGAACTTGAACGTCCAAATTTTTAACTCTGATGGAGAGTTCGTCAAGAAGATTGGAAAGGATCCTGATTCGTCTAAGGACAACAGCTTCTTTTGCAAACCAACTGGCATAGCGATATCAGAGAATGGAAACATTGCTGTGGCGGACAGAGGAAGCCACCGAGTACAGCTATTTTAA

Transcript

EGACTEQ4350040691-PA

Protein

Uniprot

Uniprot term	Description
E1BJS7	E3 ubiquitin-protein ligase TRIM71 OS=Bos taurus OX=9913 GN=TRIM71 PE=3 SV=2
Q2Q1W2	E3 ubiquitin-protein ligase TRIM71 OS=Homo sapiens OX=9606 GN=TRIM71 PE=1 SV=1
Q1PRL4	E3 ubiquitin-protein ligase TRIM71 OS=Gallus gallus OX=9031 GN=TRIM71 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01436	NHL	NHL repeat	Repeat	Interproscan
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan
PF00630	Filamin	Filamin/ABP280 repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001258	Repeat	NHL repeat	Interproscan
IPR017868	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR047153	Family	TRIM45/56/19	Interproscan
IPR001298	Repeat	Filamin/ABP280 repeat	Interproscan
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR003649	Domain	B-box, C-terminal	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR25462	BONUS, ISOFORM C-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan