Detailed information of EGACTEQ4350042597-PD in Actinia equina

Genomic Location: WHPX01001166.1:178726...205201
NR annotation: XP_031557799.1, nidogen-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P70490Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1
P21956Lactadherin OS=Mus musculus OX=10090 GN=Mfge8 PE=1 SV=3
Q8TER0Sushi, nidogen and EGF-like domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SNED1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12946EGF_MSP1_1MSP1 EGF domain 1DomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF07474G2FG2F domainDomainInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF06119NIDONidogen-likeFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR006605DomainG2 nidogen/fibulin G2FInterproscan
IPR009017Homologous_superfamilyGreen fluorescent proteinInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR024730DomainMerozoite surface protein, EGF domain 1Interproscan
IPR003886DomainNIDO domainInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR024731DomainEGF domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24039FIBRILLIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP