Gene detail

Detailed information of EGACTEQ4350042986-PF in Actinia equina

Genomic Location: WHPX01000003.1:8010...79984
NR annotation: XP_031566528.1, TNF receptor-associated factor family protein DDB_G0277243-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P18321	Profilin OS=Clypeaster japonicus OX=7644 PE=1 SV=2
P18320	Profilin OS=Heliocidaris crassispina OX=1043166 PE=1 SV=2
Q9U0E6	Profilin OS=Suberites domuncula OX=55567 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING
Ubiquitin Family	E3\|E3 activity RING\|U-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02176	zf-TRAF	TRAF-type zinc finger	Family	Interproscan
PF00235	Profilin	Profilin	Domain	Interproscan
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan
IPR048278	Family	Profilin	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR003613	Domain	U-box domain	Interproscan
IPR036140	Homologous_superfamily	Profilin superfamily	Interproscan
IPR002083	Domain	MATH/TRAF domain	Interproscan
IPR008974	Homologous_superfamily	TRAF-like	Interproscan
IPR005455	Family	Profilin, eukaryotic type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10131	TNF RECEPTOR ASSOCIATED FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan