Gene detail

Detailed information of EGACTEQ4350043731-PA in Actinia equina

Genomic Location: WHPX01000467.1:13256...40392
NR annotation: XP_031556194.1, cellular tumor antigen p53-like isoform X3 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

EGACTEQ4350043731-PA

GAAGCGTGGCAGAGTTTAGAAGTCTAAATCGTCCCTCAGGTCTGCGACTTTTCGAGCCAAAAACGTTAAACTTGGCGAAGTATTTTACTCCTGATTCTCAAGGAGTCAAACAGGAAACAAGAATGGCAGAAGAGCATGAGAATAACCTTGAACCCACCATCGGAATTGGCGACAAACACTACAAAAGTATTTTAGAAGACGTTAGAGGAACGACCAGGAATTCGTGttttttcaACGTTGGAAGTGAAGACCCTGATTTTAACCCAGAAATGAGGGGCATGTTTCCTCCATACCAGCCGATGTCGTATCCTAATGAGATGTCTATGCAGACCACAGGACCACCTGCATACCCCCAGAATATCCAAGGTCCGATATACACCAACACCACTGGGAGACGTACTCCAGGGTCCCCTGTATCATCCCAGTCAGACATCCACTATGATACGAAGAGTGCATTAAATGACAGCCTCTCTCAATACAACTCACACCTTCCCACAATCCCAAGCACCACTGAGTATCCTGGAGATCTTGGTTTTTCCCTGTCATTTGGCCCAGTTACTGAATCTGCCTCCAAGTCAGCCACATGGACCTATTCCGAGAGTTGTAAGAAACTCTATGTCAACTTGGCCAGCTTCTGTCCCATTAAGTTCAAGACAGACCATCAGCCTCCCCCTGGGTGCTACTTGAGAGCCGTCGCTGTATTCAAGGGCTCAACCAATCTGCATGACATTGTGAAGAGGTGTCCTAACCACAGTCAACCCTCTAGTGATAATCCAGACCACAATCAGCACTTCATCAGAAGTAATAACCCAACAGCACAATACCATGTGTGTCCTGAATCTGGCCGCCATTCTGTCGTCATTCCCTACCATGGACCCCAAGttGGGACAGAGTTTGTTACCGAGATGTTTGCCTTCATGTGTTTTTCAAGCTGCCCTTCTGGCCCAAGCAGGAGACCTGTGGAAATCATCTTTACTCTGGAAAAAGAAGGCCATACCCTTGGGCGTCGAGTTGTGGAGATCAGAGTTTGTGCATGTCCTGGTAGAGACAGGAAATCCAACGAGAGTCTGTCGGGTAGTGTGTCCTCAACATCTCCTCAGTCCAAGAGAAAGAAAGGACAAGGCAAGGCAAATGCCAAGAAGCAAAGAGCCGTTTCAAGTGGTGACGAGGATGAAAAAGAGTGGGCAATATTTGGTAAAGATGTGCGGGTCTACAATGTCCTGATATCTATGAAAGACCAGCTCGAGACCAATTTTTTGGAGCAGGCTACAGAAACCAATACTCACGCGTCAGAAGACGAAGACGTATTTGGGCCTAGTACATCGACTCCAACTCCAAACTTACGATATAAAAGAATGAACAACTCATCGATGTAAACTCCAACGGTCAACCAACAGCCCGGCTACTTCCGTGTAAATTTCGCTTTGCGCAGAGGTTAATGCTTTTGCGCGTGTTTGCTTTACGATCCACAAGAGGATGGCTAGTTCTATTGTGGGTCTGTTAGTTGGTAAGACAGCCTATTGGCTTGATGTCAAGGTTCTGTCTTTGCATTGATTATCCAGTGCATGCTATGCTTCTCGTTCGACGCATTGATTCTACAATGCACGGCAATTATTACTGCTCAATTTGAGCGCTTCTCTTGTAGTTTGATTGGCTTTTCAATGCACTACAATACTTCTAATTATTGCGCTACTTTGCGAGCGCACTTTTTATACTGTGACTTGGTTTGATTCGAAAGAGCCATAGCTGCGCAGATCAAGACTGTTATTTTTGTAAAAACGGTCTGTATTTTGGACGAGGAATCGATCAACCTGCCTGAGAAGTGATTTGAAGCCTTAGGTAAATCTTAGCACCGCCCAGCATTTATAGAgcttgctgattggctaatagccCACATATTTCTGGTTGTTTTAGAATAACATTTGAGGTAGAAAAATCCTTTTTGCAAGGCTCAGTTTTCGGAGTTCTTGCGGCTTCCACGTTCATCCCACTAGATTTTGGttgtacaaaatcaaaaattttattgCATTCGTTCTAGCAATGCACCCGGCCTCACAGCGTTGGCATACTTTGGTTGTATCGAAGTACCAACCGCACAATTCAAATGGCTACTAAGTGATTACACACGCTTTAGTAACTGCTTTGGTTTTGCAGAGCTAATATTACATCACCACGATTAGGCTTGCTCTCCTCCGACAAAATACGTACCCACTCCTCCCTCAACAATTTTGGATCATTCACAC

Protein

Uniprot

Gene family

Uniprot term	Description
Q9JJP2	Tumor protein p73 OS=Mus musculus OX=10090 GN=Tp73 PE=1 SV=1
O15350	Tumor protein p73 OS=Homo sapiens OX=9606 GN=TP73 PE=1 SV=1
P25035	Cellular tumor antigen p53 OS=Oncorhynchus mykiss OX=8022 GN=tp53 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	P53

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00870	P53	P53 DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012346	Homologous_superfamily	p53/RUNT-type transcription factor, DNA-binding domain superfamily	Interproscan
IPR002117	Family	p53 tumour suppressor family	Interproscan
IPR011615	Domain	p53, DNA-binding domain	Interproscan
IPR008967	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11447	CELLULAR TUMOR ANTIGEN P53	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0006915	Biological Process	apoptotic process	Interproscan
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10149	TP63; tumor protein p63	-	Transcription factors	ko03000	deepkoala