Gene detail

Detailed information of EGACTEQ4350044159-PA in Actinia equina

Genomic Location: WHPX01000951.1:210364...213351
NR annotation: XP_022807256.1, uncharacterized protein LOC111344300 [Stylophora pistillata]
Species Actinia equina · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

EGACTEQ4350044159-PA

ATGGAATATGTTGCcggggaaaaggaaaaaaaagagtttaGCGAAAATTTATCTTCAATACCTCTATCTGAGTATGCCAAGAAGCTGGAAACTCGAGTGAAACGGCGTTATCTTGATAAAATTTCGTCGATTGGAATCGACCCCGTGTTAGTTGACAGCAACCTTTTTGAGCCGGACTGTTTACCTCCAGTAGAATCTACAGATCTGCTATTTTATCTCGTCCTAGAAACAAGTTTCTACACAAACCAACAGTTTAAAGCTTTTCGTAGTCTGGAAGCTTATAATCAGATGGTCTCCGGATTTATTGCAAGCGTAGAAGGCCACATCATTTCTGACAAGTTTGTTGTTGTCGCGAAGGTGAGACATTCTCAGCGAATGAACGATGCTCTGATCCCAGTATGGATAATCACAGAAAAACAGGGGAACATAATTTCTTGTCACTGTTTAGGTTGTAAAGCGGGTCTTGGTGAGTCGTGTTCTCACGTAGCTAGCGTACTATTTTACCTAGAAGCCTGGACGAAAATAAACGGCAAGTTATCCTGTACCCAAGTAAAGTGCACGTGGATTTTGCCAACCTACGTGAAACAAGTTGATTATGCTAGAGTACGAGATATCAATTTTACTTCTGCACGAAAAATGAAGACGGACttagagaaaaaaatcgattatCATAACGATATTCCCAGTCAAAGCAAGTCAACACAAGTTTTAGGAACATTAaagtcttcttcaaaagaatgcAAAGCTCCTACAGAACCGGAAATGGATGCTTTCTACGCGGAAATCAACAAGAGTCAAAACAAGGCCGTGGTTCTAAGCTTGATTTCTCCATTCTCAAGTAGCTTTTGTGCTGAAAAGCAGATCTGTTCCAACAAGCTAGCCAAGTTTACCACTAAAGCCACTGTTCATGGTTGTAAACATGAGGAAGATGCTATCAAGGCctatgaacaaataatgaaaggGAAGCACACCAATTTCAAGGTTCAGAAGTGTGGTCTGTTTATCAATGAAGCTTATCCATATATACATGCGACACCTGACTTCTTATGTTCTTGTGACTGTTGTGGAGAAGAATGTGGGGAGGTGAAATGCCCTTTTTGCATTGAGGACTGTGACTTTAATAGCTATCTATCAAAGTCATCATGTTGTCTACTAAAAGATAACAATGAAATGTTTACCCTTAAGCATGATCACCAGTATTACTATCAAGTTCAGCAGCAGCTGTTTACTTTACACAAAGATTACTGTGACTTTGTTGTATGTGCATTTGGAGATGATGGGAGTACGACACTTGTCCAGCCGAGAATATTCCCAGACAAAGAACACTGGGAAATTGCATTGCCAAAGCTCACCACTTTTTGGAGAACCTGTGTCTTACCTGAAGTGCTTGGCAAATGGTCCACTAGAAGGCATACTTCAAAAACAAGTGAGCCAACAGCAAGTGGGGCTATTTGCTTTTGTAGAACTGCCCAAGATAGATCATGTGTCTGTTGTGCCAACCCCATGTGCCCAATCAGTACATTTCATCTTTCATGCTTGGGACTGACAACCACACCCAAAACATGGTACTGCCCAAATTGCAGATTGTTACCTGAATTCAAAAACTCTAAAGGCAAGTCCCaatcaagcaagaaaaaaatagcatCTTCTAAAGCCTTGGCCCTGGATGATATCTGTATATGCAAGagcaaggcaaagaatacagaTAAGCTTATTGAGTGCCATAACCCTGTGTGCAAAAATGGAACATTTTTTCACTTGGCCTGTTTAAGCCTTAAACGTATGCCAAACAATGCTAATTCCACATGGTTATGCCCAGATTGTAAAAAGAACCAAGCACAATCTAATAAGAAAAATGGAAGTGGAAGTGTCAAGTTTGTCAAACAAATCCAAGGAACCAACAGCAGTGTCAGTGACAAACAAAAGCCACTTGGAAAGCTTACACAGTCAGAGTTTGACCTTATTGCATCTCCAACAGGATGGTTAGACTGTTCTGTGATCCAAGAAGCACATGTACTGCTTATGAAAGTCAACAGCAATGTAAgtggtttccaaagaccaaccCTCGGTCCTGTCAGACAGTTCAGTGTTGTTACTGGTGATTTCATTCAGATAGTGCATTTGAATAACAATCACTGGGCATGCTTAACATCTATTGGCTGTCTTCCTGGGTATGTTAACCTGTTAGACAGCATGACATCACCAATTTTGCAAGAGATAATTGAGCTCACGAAGAATTTGCTTGGTCCAAATTTCAAGAACATCACTCATATACCTGTACAGCAACAGCAAAATGGGAGTGATTGTGGTGTGTTTGCCATTGCATATGCCACATGCCTAGCCTATAGTAAAACTCCAGTTGTGAAGTTCATCATTCCAAGGATGCAGCCACATTTGCTGAGTTGTCTTAAAGCTGGTCATTTGACACTTTTCCCTACCACTTGA

Transcript

EGACTEQ4350044159-PA

cttcggtattctagtccgatgtgttaaccactacactacaaggaccaaccacgctggtatcgcagccagaatatgaaatgtagggtgtTCGTGAGGATCACGTGTCGTCATCAATTTCCggtcgccatattggtgtacctcgATAGCGTGACTATGCAAAAGCATGTGTGTAACAATCATGCCATGACTAGCGAAGTGCTAGTAATAATATGGAATATGTTGCcggggaaaaggaaaaaaaagagtttaGCGAAAATTTATCTTCAATACCTCTATCTGAGTATGCCAAGAAGCTGGAAACTCGAGTGAAACGGCGTTATCTTGATAAAATTTCGTCGATTGGAATCGACCCCGTGTTAGTTGACAGCAACCTTTTTGAGCCGGACTGTTTACCTCCAGTAGAATCTACAGATCTGCTATTTTATCTCGTCCTAGAAACAAGTTTCTACACAAACCAACAGTTTAAAGCTTTTCGTAGTCTGGAAGCTTATAATCAGATGGTCTCCGGATTTATTGCAAGCGTAGAAGGCCACATCATTTCTGACAAGTTTGTTGTTGTCGCGAAGGTGAGACATTCTCAGCGAATGAACGATGCTCTGATCCCAGTATGGATAATCACAGAAAAACAGGGGAACATAATTTCTTGTCACTGTTTAGGTTGTAAAGCGGGTCTTGGTGAGTCGTGTTCTCACGTAGCTAGCGTACTATTTTACCTAGAAGCCTGGACGAAAATAAACGGCAAGTTATCCTGTACCCAAGTAAAGTGCACGTGGATTTTGCCAACCTACGTGAAACAAGTTGATTATGCTAGAGTACGAGATATCAATTTTACTTCTGCACGAAAAATGAAGACGGACttagagaaaaaaatcgattatCATAACGATATTCCCAGTCAAAGCAAGTCAACACAAGTTTTAGGAACATTAaagtcttcttcaaaagaatgcAAAGCTCCTACAGAACCGGAAATGGATGCTTTCTACGCGGAAATCAACAAGAGTCAAAACAAGGCCGTGGTTCTAAGCTTGATTTCTCCATTCTCAAGTAGCTTTTGTGCTGAAAAGCAGATCTGTTCCAACAAGCTAGCCAAGTTTACCACTAAAGCCACTGTTCATGGTTGTAAACATGAGGAAGATGCTATCAAGGCctatgaacaaataatgaaaggGAAGCACACCAATTTCAAGGTTCAGAAGTGTGGTCTGTTTATCAATGAAGCTTATCCATATATACATGCGACACCTGACTTCTTATGTTCTTGTGACTGTTGTGGAGAAGAATGTGGGGAGGTGAAATGCCCTTTTTGCATTGAGGACTGTGACTTTAATAGCTATCTATCAAAGTCATCATGTTGTCTACTAAAAGATAACAATGAAATGTTTACCCTTAAGCATGATCACCAGTATTACTATCAAGTTCAGCAGCAGCTGTTTACTTTACACAAAGATTACTGTGACTTTGTTGTATGTGCATTTGGAGATGATGGGAGTACGACACTTGTCCAGCCGAGAATATTCCCAGACAAAGAACACTGGGAAATTGCATTGCCAAAGCTCACCACTTTTTGGAGAACCTGTGTCTTACCTGAAGTGCTTGGCAAATGGTCCACTAGAAGGCATACTTCAAAAACAAGTGAGCCAACAGCAAGTGGGGCTATTTGCTTTTGTAGAACTGCCCAAGATAGATCATGTGTCTGTTGTGCCAACCCCATGTGCCCAATCAGTACATTTCATCTTTCATGCTTGGGACTGACAACCACACCCAAAACATGGTACTGCCCAAATTGCAGATTGTTACCTGAATTCAAAAACTCTAAAGGCAAGTCCCaatcaagcaagaaaaaaatagcatCTTCTAAAGCCTTGGCCCTGGATGATATCTGTATATGCAAGagcaaggcaaagaatacagaTAAGCTTATTGAGTGCCATAACCCTGTGTGCAAAAATGGAACATTTTTTCACTTGGCCTGTTTAAGCCTTAAACGTATGCCAAACAATGCTAATTCCACATGGTTATGCCCAGATTGTAAAAAGAACCAAGCACAATCTAATAAGAAAAATGGAAGTGGAAGTGTCAAGTTTGTCAAACAAATCCAAGGAACCAACAGCAGTGTCAGTGACAAACAAAAGCCACTTGGAAAGCTTACACAGTCAGAGTTTGACCTTATTGCATCTCCAACAGGATGGTTAGACTGTTCTGTGATCCAAGAAGCACATGTACTGCTTATGAAAGTCAACAGCAATGTAAgtggtttccaaagaccaaccCTCGGTCCTGTCAGACAGTTCAGTGTTGTTACTGGTGATTTCATTCAGATAGTGCATTTGAATAACAATCACTGGGCATGCTTAACATCTATTGGCTGTCTTCCTGGGTATGTTAACCTGTTAGACAGCATGACATCACCAATTTTGCAAGAGATAATTGAGCTCACGAAGAATTTGCTTGGTCCAAATTTCAAGAACATCACTCATATACCTGTACAGCAACAGCAAAATGGGAGTGATTGTGGTGTGTTTGCCATTGCATATGCCACATGCCTAGCCTATAGTAAAACTCCAGTTGTGAAGTTCATCATTCCAAGGATGCAGCCACATTTGCTGAGTTGTCTTAAAGCTGGTCATTTGACACTTTTCCCTACCACTTGAACTTCTTGAGGCATTtattttggaataaaaattatTGCCTATTTCTTTAGTTTCATGAGACATTTATCTCTAAAGGTTTAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000044 (this species only)
Ubiquitin family	DUB\|ULP\|ULP · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02902 all species →	Peptidase_C48	Ulp1 protease family, C-terminal catalytic domain	Domain	Interproscan
PF09588 all species →	YqaJ	YqaJ-like viral recombinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR001965 all species →	Domain	Zinc finger, PHD-type	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR003653 all species →	Domain	Ulp1 protease family, C-terminal catalytic domain	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR011335 all species →	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR007527 all species →	Domain	Zinc finger, SWIM-type	Interproscan
IPR019080 all species →	Domain	YqaJ viral recombinase	Interproscan
IPR019787 all species →	Domain	Zinc finger, PHD-finger	Interproscan
IPR011604 all species →	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47526 all species →	ATP-DEPENDENT DNA HELICASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008234 all species →	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for EGACTEQ4350044159-PA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.