Gene detail

Detailed information of EGACTEQ4350045414-PB in Actinia equina

Genomic Location: WHPX01001314.1:40583...59727
NR annotation: XP_031569206.1, uncharacterized protein LOC116303754 [Actinia tenebrosa]
Species abbreviation AEQUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for EGACTEQ4350045414-PB in AEQUI (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7TSH7	Voltage-gated potassium channel regulatory subunit KCNF1 OS=Mus musculus OX=10090 GN=Kcnf1 PE=1 SV=1
D4ADX7	Voltage-gated potassium channel regulatory subunit KCNF1 OS=Rattus norvegicus OX=10116 GN=Kcnf1 PE=1 SV=3
Q9H3M0	Voltage-gated potassium channel regulatory subunit KCNF1 OS=Homo sapiens OX=9606 GN=KCNF1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005781 (this species only)
Transcription factor family	zf-C2H2 · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00060 all species →	Lig_chan	Ligand-gated ion channel	Family	Interproscan
PF13465 all species →	zf-H2C2_2	Zinc-finger double domain	Domain	Interproscan
PF07885 all species →	Ion_trans_2	Ion channel	Family	Interproscan
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR001320 all species →	Domain	Ionotropic glutamate receptor, C-terminal	Interproscan
IPR013099 all species →	Domain	Potassium channel domain	Interproscan
IPR050752 all species →	Family	C2H2-type zinc-finger domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24384 all species →	FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015276 all species →	Molecular Function	ligand-gated monoatomic ion channel activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09228	KRAB; KRAB domain-containing zinc finger protein	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.