Gene detail

Detailed information of EGACTEQ4350047219-PA in Actinia equina

Genomic Location: WHPX01001124.1:369494...375954
NR annotation: XP_031570397.1, E3 ubiquitin-protein ligase RNF31-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350047219-PA

ATGTCTATTAAGGAAGAAATAGATTGTCCAACTTCCAAAGTTGGTGGTAAATCTTCTTCCAATGATAACCTAACATTAACGTTTGACATACCTTTATATACCATGGGAAGCCCATTAAATTCATCAAAGCCGTTACAACAATATTTCATAAGACCCACATTGCCGAGGGCCACATTGTCTACTAACACCGCAACAGTTCCATCGGGAAGTTATATACAATCTcctatatcatcaccatcaagaAGTCCTACACCACCATACCGCAGATCTGGCAGCCCTTTTTCAGATAATCCTATGCATGGAAAGGTCATGTTCATCAtgagaagaaagacaagaatGCTTCCTAATCCCAAGAAAGCACACTCCATTGAGATGAGAATTACTGAAACCAGAGAAAAATTCTCAGAAATCTATCTTTCTGGAGCAGAGTCTGAAAAACGTGGATTGTGCAGACACTTGATTGATGAAGATGCTCCAATCAACACCAAGTACAAAGAGCTTGATTTCGAATCTTTGTTGAAACAGAACTTGGTTCAATCCAGAGTTACATACCTCGTCCAAGCTCTAGCCATCCAAGAAAAATACGCATCAAACTTGATCAAGGACGTTAGACCTCAGTTTTGGAGAACTGTTAAATTCACCAGCAGTTTATGGAAAACGTACCTGGAGAACATTAACGGTAGTGTAGAAATCCTAAAGAAAATGGGATACACTAAGCATCTCAAGGATGGACTCTCATTTCCTGAAGATATAAACGAACCAGATATTGTACGCGTCAAAGAAATTGCCGCGGATTTGTATCTAGCGAAAATTGAAACAGATGACTTGATTCAAAACAGACATCCTTATTACGTCATCGAGTCAAACCAAAGGGAAGCATCTTCTGGGCCGTCAAAAggACAAATACGTGCTCCAACTGGAAAAGAAATCTCCACGAGTGAAGATAGTGATTCTGAATACGAAGATGCTAAAGATAGATTATCGAATGAAGACGATACCGCCTCTGCACAACGAGTACCTGTCATTACCTTGAAGCAGGCTATCTCTTCTCCTCCACCAGATTGTTTTATTTGTGGAGAGCAAACAGTAGTTTGGTTTTGCAAAGATTGCAAAGAGCACTTCTGTCAGGACTGCGACGTGAAATTTCACAGTCATCGTGACAGAAAAACTCATGACCGTCAAAGATTCGGAGGTGAAACCTCCGTGACTACGTATACCAGCACATCGAAAAGTGCTGGAGACGAGATTGTCTCGCCGACACTAAGAAAGCACGAAAATATCGTTTCCCAAAGACCATCGCCCACAAGACTGGAGAAGGATGGTATTAAAATGCAAAAGCCAGTTCCAAAGCCAAGGAAAAGAATTCCAAGCAAGACCACGAGAGTGTCTAGTCCAGGAGGCATGACTACCAGTGTGTCTAGTCCAGGAAGCAAGACCACGAGAGTGTCTGGTTCAGGAAGCATGACTACCAGTGTGTCTAGTCCAGGAAGCATGACTACCAGTTTGTATAGTCCAGGAAGAATGCCAATTACGAAACGTTGTGACATGGCTACCAGCCCTAGCGTAGAGGAGCTGCCTCCGCCTCTCTTTGGGAGAACGATTCAAAGTCCAACACACTTTAACAAGAATATGACAGAATCTGGTTCTGTAATTAAAGAAAAAGTGCCTCAACAGCCGAGTATACACACCATTGAACGTGAGATTCTACGGCCACCAAATGTTGCAGAGTACGAGCCGATGAAAGAACCACTGAAAATACTCTTACAGTCCCAGCAGCAAGAAGAACCCATTTACGAGTCACTGAAAAACCCAGAAAACCACATCTATGAAACACTAGATCATCAAAGCAAAGATCCTCCACCTCCTCCTTTGCCTCCAAAACATCTTAAAAGAGAGACTACAACAGCTCCAGTTTACAAAGGCGCGACCACTTGTCCATATTGCTATTGTTTGAATACATCTGATACTGTAAAATGTAACGCGTGTGGAAGGCAATTGCTTGAACAATCTACAATTACAGCAAAGTCGACGCTCCAGACATGA

Transcript

EGACTEQ4350047219-PA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026254	Family	E3 ubiquitin-protein ligase RNF31-like	Interproscan
IPR046349	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR047543	Domain	E3 ubiquitin-protein ligase RNF31-like, Bbox1 zinc finger	Interproscan
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR036339	Homologous_superfamily	PUB-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16004	RING FINGER PROTEIN 31-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0036435	Molecular Function	K48-linked polyubiquitin modification-dependent protein binding	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0070530	Molecular Function	K63-linked polyubiquitin modification-dependent protein binding	Interproscan
GO:0071797	Cellular Component	LUBAC complex	Interproscan
GO:0097039	Biological Process	protein linear polyubiquitination	Interproscan
GO:1990450	Molecular Function	linear polyubiquitin binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan