Detailed information of EGACTEQ4350047634-PA in Actinia equina

Genomic Location: WHPX01001155.1:532508...541394
NR annotation: XP_031561254.1, putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O43143ATP-dependent RNA helicase DHX15 OS=Homo sapiens OX=9606 GN=DHX15 PE=1 SV=2
O35286ATP-dependent RNA helicase DHX15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=2
Q5RAZ4ATP-dependent RNA helicase DHX15 OS=Pongo abelii OX=9601 GN=DHX15 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF04408HA2_NHelicase associated domain (HA2), winged-helixDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF07717OB_NTP_bindOligonucleotide/oligosaccharide-binding (OB)-foldDomainInterproscan
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044756DomainDHX15, DEXH-box helicase domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR048333DomainHelicase associated domain (HA2), winged-helix domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR007502DomainHelicase-associated domainInterproscan
IPR011709DomainDEAD-box helicase, OB foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12820DHX15, PRP43; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43EC:5.6.2.6
Ribosome biogenesisko03009deepkoala

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