Detailed information of EGACTEQ4350047665-PC in Actinia equina

Genomic Location: WHPX01001352.1:463109...475015
NR annotation: XP_031562220.1, transcription initiation factor TFIID subunit 5-like [Actinia tenebrosa]
Species Actinia equina · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for EGACTEQ4350047665-PC in AEQUI (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q15542Transcription initiation factor TFIID subunit 5 OS=Homo sapiens OX=9606 GN=TAF5 PE=1 SV=3
Q8C092Transcription initiation factor TFIID subunit 5 OS=Mus musculus OX=10090 GN=Taf5 PE=1 SV=1
P49846Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster OX=7227 GN=Taf5 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001573 (this species only)
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →
WD40WD domain, G-beta repeatRepeatInterproscan
PF04494
all species →
TFIID_NTD2WD40 associated region in TFIID subunit, NTD2 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007582
all species →
DomainTFIID subunit TAF5, NTD2 domainInterproscan
IPR037264
all species →
Homologous_superfamilyTFIID subunit TAF5, NTD2 domain superfamilyInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR020472
all species →
RepeatG-protein beta WD-40 repeatInterproscan
IPR019775
all species →
Conserved_siteWD40 repeat, conserved siteInterproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR006594
all species →
Conserved_siteLIS1 homology motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19879
all species →
TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005669
all species →
Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006367
all species →
Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251
all species →
Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for EGACTEQ4350047665-PC.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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