Gene detail

Detailed information of EGACTEQ4350047686-PA in Actinia equina

Genomic Location: WHPX01001027.1:313910...328425
NR annotation: XP_031568512.1, RNA-binding motif, single-stranded-interacting protein 1-like isoform X4 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B3NGA1	Protein alan shepard OS=Drosophila erecta OX=7220 GN=shep PE=3 SV=1
B4PIS2	Protein alan shepard OS=Drosophila yakuba OX=7245 GN=shep PE=3 SV=1
B4HUE4	Protein alan shepard OS=Drosophila sechellia OX=7238 GN=shep PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR002343	Family	Paraneoplastic encephalomyelitis antigen	Interproscan
IPR050502	Family	Eukaryotic RNA-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48025	OS02G0815200 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24990	RBMS; RNA-binding motif, single-stranded-interacting protein	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala