Gene detail

Detailed information of EGACTEQ4350047697-PA in Actinia equina

Genomic Location: WHPX01000359.1:503263...509798
NR annotation: XP_031553902.1, mitogen-activated protein kinase kinase kinase 1-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350047697-PA

ATGGCTACTCAGAGCCCAACTGAGAATATACTTCCAAACTGGAAGAAAGCAAGTAAACAGAATGAAGCTTCGAAATCGGATCAAGAAAAAAAGCCAGCTTCGTTCAAGATGACCGAGAGCGCCAAACCGATGCTAGAAGAACAAGctcttttaaaagaaaaactcaaATCGCAACCAATATGGAAAAAAGACAAGGACGCGACTCAAAGACGCAAAACACAACCTATGGTTGCAAGACCTCTTTCACCTGGCTCTGCTCCCAAACAGATTTTTCCTCAAGTAACAGCCTCAACATCAACTAAGCCACCCTCTCCCCCACCAAAGCGACGCACGACCTCACCATCCAGCTCATTCAATGCTGGTTGTTCCAGAAGTTCATCTCCATTATCTGAAGCTTCTCCAGAATTTAAGAGAAGAATTGAAAAAGCCACCCGAGCTAGATTATACCTGTTACAGCAAGTAGGACCCAATTCTTTCTTGATAGGAGGAGACTCACCCAGTCACAAGTTTAAAGTCATCATTGGACCACAGACATGCACATGTGGAAAGTCCTTCTGTGTTCATCTCTTATTTGTTATGTTGAGAGTCTTTAAAGTCAAAGAAAATGATCCACTTTTATGGAACAATGACCTGAAGAATTTTGAGGTTGAAGGACTCTTTTCAAAATTCCATGCAAGAGTCAACTCGAGGCTTGTCAAAGGTAGAGGCAGATCACCCAAGCGATCAACTCCCCCACCCTCCCCTAGTGGCCTAAGTTCATCCACATCCTCCACGTCGTCTACTGGAAGTActaaagatgaagaagaagtcTGTCCAATATGTCTACTAGAGATGGTTGAGGGAGAGAGCTTGACGTGTTGTAAGGGAGGCTGCAACAACAGACTTCACCAACACTGCATAGAAATATGGGCTGCTGAATGCAAGAGCAGGAAAGAAAGACTTAACTGTCCACTCTGCCGTAGAATCCTTCCTCCAGAGGTTGCACCTTTCCTTAGTAACAGATCACCTCAAATTCTCTCACCTCTGTCACCAAGTAGAACAGTCTCACCCAATGTACCAACACCTCTTGCTCCGGAAGAGGTCATTACGCTACCACACTCTAACCCAATCCCCTCTGAACAGATAGATGTTGCAAGACCCTGGGTACAAGCATTTGGAGAGAGTGTGGTGTCTTGTCTGTTTTCTCGTGAGTGGAACATAAGAGAAACTGCCTTACGTCGTCTCAGCAAGGATTTAGTAAGCACTCTAACTAGTGATGAAGGAGGGTCTACCTCAATGTCTGCTCTAGAAGCTTGCTGTTCTCTCCTGTCCATGATGTGTTGTGATCCAGTTTACAAAGTTTATGTTGCAGCTCTTAGAACTTTACGAGTCATGCTTGGCCATTCTATGTATTCGACCAGTGAAGAGAAAGCACAGCTACAGATGCTGTTACGTCCTGTGGTGGAGGCTATTATGACAAAGTGTTCTGATGGCAACAGACGAATCAGCGCCCTGTCAAACAAAGTGCTCTTAGAGATGTGTAAAGATCAGTCAGGTGACCTGGCACTAGGGCGATTGCTGGAGCACAATGGCAACCAATCACTGGGCGGTCTCAGCTTCATGCTGACATGCATACTTACTACTGCGCATGAATATGCTACCTGGCCTTGGTGGCTTGGACGGTTGTACTTTCTACACAAGTTAATAGAAGAATATACAGACTCTTTTAGGCTAGGACCAGACAGTCCGGAAATATCTATAGATAACAGTGTTGGTGTCATTGTCCAGGAAGGTGATCATGTCGATGGTGATGAGTTATATAGTGACAATATAACGAGGTTGATGTCTGTATTGCGGTTCGCTATTCTTGCTGGACAGTGCTCCCATGGTTCAGTCTCTAAGCTTGCTATTTCAATATTGATTTGCTGTACAAGTTTAGCTGCATCTTGTCCGTCTGCCTTTATTCATATCAAGAAGCTAGTATCTCGACTAAAGCCATCTCAGAGAAGTATATTACAGCGGCGACTAGCAACATTATCAAAGAGGAACAATCCAGAAGCTAGTGATGGAGAAAGCAGCCCTCTAAGTGATGTAAGCTATGCCCTCACAGATCAAGGAGAGTCGAGCTCTTCCGAAGGATCTAGTCAGTTGTGCCCTACTGCAAAGATTGGAAGGCGGTCCATCACACTTGAGGGAAGACAACGACCATCTATCTGA

Transcript

EGACTEQ4350047697-PA

Protein

Uniprot

Gene family

Uniprot term	Description
P53349	Mitogen-activated protein kinase kinase kinase 1 OS=Mus musculus OX=10090 GN=Map3k1 PE=1 SV=3
Q62925	Mitogen-activated protein kinase kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map3k1 PE=1 SV=1
Q13233	Mitogen-activated protein kinase kinase kinase 1 OS=Homo sapiens OX=9606 GN=MAP3K1 PE=1 SV=4

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21040	CEP104-like_TOG	Centrosomal protein CEP104-like, TOG domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR039903	Family	E3 ubiquitin-protein ligase Zswim2	Interproscan
IPR007527	Domain	Zinc finger, SWIM-type	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21540	RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan