Genomic Location: WHPX01000911.1:249088...251260
NR annotation: XP_031558647.1, galactokinase-like [Actinia tenebrosa]
Species Actinia equina · all data for this species · gene families
EGACTEQ4350051928-PB in AEQUI (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| P51570 | Galactokinase OS=Homo sapiens OX=9606 GN=GALK1 PE=1 SV=1 |
| A6H768 | Galactokinase OS=Bos taurus OX=9913 GN=GALK1 PE=2 SV=2 |
| Q9GKK4 | Galactokinase OS=Canis lupus familiaris OX=9615 GN=GALK1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008366 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10509 all species → | GalKase_gal_bdg | Galactokinase galactose-binding signature | Domain | Interproscan |
| PF00288 all species → | GHMP_kinases_N | GHMP kinases N terminal domain | Family | Interproscan |
| PF08544 all species → | GHMP_kinases_C | GHMP kinases C terminal | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019539 all species → | Domain | Galactokinase, N-terminal domain | Interproscan |
| IPR000705 all species → | Family | Galactokinase | Interproscan |
| IPR006206 all species → | Family | Mevalonate/galactokinase | Interproscan |
| IPR019741 all species → | Conserved_site | Galactokinase, conserved site | Interproscan |
| IPR006204 all species → | Domain | GHMP kinase N-terminal domain | Interproscan |
| IPR020568 all species → | Homologous_superfamily | Ribosomal protein uS5 domain 2-type superfamily | Interproscan |
| IPR036554 all species → | Homologous_superfamily | GHMP kinase, C-terminal domain superfamily | Interproscan |
| IPR006203 all species → | Conserved_site | GHMP kinase, ATP-binding, conserved site | Interproscan |
| IPR014721 all species → | Homologous_superfamily | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup | Interproscan |
| IPR013750 all species → | Domain | GHMP kinase, C-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10457 all species → | MEVALONATE KINASE/GALACTOKINASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004335 all species → | Molecular Function | galactokinase activity | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0006012 all species → | Biological Process | galactose metabolic process | Interproscan |
| GO:0046835 all species → | Biological Process | carbohydrate phosphorylation | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0016301 all species → | Molecular Function | kinase activity | Interproscan |
| GO:0016773 all species → | Molecular Function | phosphotransferase activity, alcohol group as acceptor | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
EGACTEQ4350051928-PB.Genes whose expression across the transcriptome samples of Actinia equina tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Actinia equina, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | not in the sequence table | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | not in the sequence table | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
