Gene detail

Detailed information of EGACTEQ4350051952-PA in Actinia equina

Genomic Location: WHPX01000909.1:172151...185649
NR annotation: XP_031567011.1, organic cation transporter protein-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

EGACTEQ4350051952-PA

TGCAAAaagcatgaaattagcataattatttgtcttcccatgctccccttcggtcttagctttgaggATATAACCTATTTTTAcccaacaacgttttttcaattaggtgtatacgcACTACTGCACACAAGGTAGCCGTATTTCTAACAGTAGCGTTTCGCCTAATTTGCATTTATAGGAGACCGTAGTGTCCAGGTGAATTCACTGAGTTGCTTGGAGGGCTAATCGGTTGATTAAAAAACACTTACTTCTTGAAGTCAGATCAGCCAAGATGAATTGCAAAGAGGATAAAGAAATCAATCTTAATGACAAACAGgaGAAAGAGATGTTGTCGTCATCAGACGATACGCCAATCGCAGTCGATGACGTCATGGAGAAGATAGGCAGTTTTGGTCGGTACCAGGCACGACTCTTCATGATCATGGGATTCATGAAAATGTTTGGTGATGGATTCCAGGCAATGATTCCTACATTTCTTGCTGCTGAACCTCCCTGGCAATGCGTCGAGAACAGCACCGCCTGTAACGTCACCGGGAGCATATCACCAGGGAACAAATTCTACGGTCTTAGATGTAGCTTGCCTCGTTCTGATTGGAAGTTTGATACAAGTGAATTCACTTCCATCGTATCTGAGtgGGATTTGGTATGCGATCGCTCTAGCCTAGGTAGTCTATCCAAGAGTGTGGTGTTCACTGGCTACATGATAGGGGTACTTTTTGGAGGGATTCTATCGGATAAGTTTGGAAGAAAACCCATTGTGTATTTTCCATCGTTACTATGTAATGTACTGGCATTGATTTCCTCGTTCGTGAATGCGTTTTGGGTGTTTACTTTGCTTCGGGGGTTGATAGGGATTTGTATTGgGAGCTCAAGTTTGTCAATGTTCATTCTCTTGCTGGAGTATGTAAATCCTAAACAGCATGCAGTCAGTGGGACTAGTCTCTGGTACTTCTGGActttctctctgatgctactTTCATTATTTGCATGGATTTTCAAGGCGGAGTGGCGACTTTTGTCGATTGCTGGTGCAACTCCTGGCTTGCTGCAAGTATTCTTTTGGTGGTTCATTCCCGAATCCCCTCGTTGGTTGATGGTAAACAACAAGTCAGAACAAGGAACAAAGTATCTCCGTGAAGTTGCACAGTTCAATCGAAAAGTCATGCCTTCTAATCCTGTTGTAGTAGTGACCACCAAGCAGCGCGTTGGGGACTTCAGAGATTTGTTTCGATCGTTAAAGATGGTGCATACGACTCTTGTTAACTGGCTTTGCTGGGTAGTTGTCTCTATGATTTACTATGGCGTCTCATTCAGTACTGGAAGCTTTGGCGGCAATTCTTACCTCGTGTTCTTTCTCACATCCATCGTGGAAATTCCTTCACATTTTACTGCCTTCGTTCTAATGAACAGGATTGGTCGTAAAAAGACCACCTTCTTGGGTCTCATGGTTGCGAGTTTTGCTGCCACGTGTGCTGTCCTTCTTCAAAAAGATAATTCTGAAACAGGTTTCCTTGTCGGTCGCATCATCATGGCCATGACAGCCAAGTTCTTTATCAACATGTCATTCGCTACAATCTACGTCTTCTCTGCAGAACTTTTTCCCACTGTTGTCAGGAATGTTGGCATGGGGTCATCGTCAGCAGTTGGACGTATTGGGTCTATCTCTGCACCTTTTATTGTTTGGCTGGTTCGAATTCACGTGTTGCTGCCGTACTCAATCATGGCTGTCACGGCGTTCCTCACAGGATTGGCTTGCCTTACTCTTCCGGAAACAACGAATGCACCAACCGCTGAagcttttgaaaagaaaaaatctccACTGATAGACAACTgtgaaaaagaagagaaagtaTAGAAACAGATATACAGCCTGGACATTATTCCACCCTTTTTTGGAATTACACGACCAACACAACCCCAGATACATACAGTGCCTTGTGATTCAAGAAGACTTGCCTTCTGATTTGCAGAACCTTttgtttgaatttatatttttcaaggaAAATATAACCTCAAAAG

Protein

Uniprot

Uniprot term	Description
Q9VCA2	Organic cation transporter protein OS=Drosophila melanogaster OX=7227 GN=Orct PE=1 SV=1
Q95R48	Organic cation transporter-like protein OS=Drosophila melanogaster OX=7227 GN=Orct2 PE=2 SV=2
Q8IZD6	Solute carrier family 22 member 15 OS=Homo sapiens OX=9606 GN=SLC22A15 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00083	Sugar_tr	Sugar (and other) transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR005829	Conserved_site	Sugar transporter, conserved site	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR005828	Family	Major facilitator, sugar transporter-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24064	SOLUTE CARRIER FAMILY 22 MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08202	SLC22A4_5, OCTN; MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5	-	Transporters	ko02000	deepkoala