Gene detail

Detailed information of EGACTEQ4350052755-PA in Actinia equina

Genomic Location: WHPX01000017.1:152820...159962
NR annotation: XP_031569466.1, nucleoporin SEH1-like [Actinia tenebrosa]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
A7YY75	Nucleoporin SEH1 OS=Bos taurus OX=9913 GN=SEH1L PE=2 SV=1
Q5RAN6	Nucleoporin SEH1 OS=Pongo abelii OX=9601 GN=SEH1L PE=2 SV=1
Q96EE3	Nucleoporin SEH1 OS=Homo sapiens OX=9606 GN=SEH1L PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR037363	Family	Sec13/Seh1 family	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11024	NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005198	Molecular Function	structural molecule activity	Interproscan
GO:0031080	Cellular Component	nuclear pore outer ring	Interproscan
GO:0034198	Biological Process	cellular response to amino acid starvation	Interproscan
GO:0035859	Cellular Component	Seh1-associated complex	Interproscan
GO:1904263	Biological Process	positive regulation of TORC1 signaling	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14299	SEH1; nucleoporin SEH1	-	Membrane trafficking	ko04131	deepkoala