Gene detail

Detailed information of EGACTEQ4350053048-PA in Actinia equina

Genomic Location: WHPX01001214.1:160593...174486
NR annotation: XP_031564302.1, polyadenylate-binding protein-interacting protein 1-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9W2H1	TM2 domain-containing protein biscotti OS=Drosophila melanogaster OX=7227 GN=bisc PE=2 SV=1
A5PLH4	TM2 domain-containing protein 1 OS=Danio rerio OX=7955 GN=tm2d1 PE=2 SV=1
Q9BX74	TM2 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TM2D1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05154	TM2	TM2 domain	Domain	Interproscan
PF02854	MIF4G	MIF4G domain	Repeat	Interproscan
PF07145	PAM2	Ataxin-2 C-terminal region	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003890	Domain	MIF4G-like, type 3	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR007829	Domain	TM2 domain	Interproscan
IPR009818	Domain	Ataxin-2, C-terminal	Interproscan
IPR051367	Family	mRNA Translation Regulation/Replication-dependent Histone mRNA Translation	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23254	EIF4G DOMAIN PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006446	Biological Process	regulation of translational initiation	Interproscan
GO:0008494	Molecular Function	translation activator activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14322	PAIP1; polyadenylate-binding protein-interacting protein 1	-	Messenger RNA biogenesis	ko03019	deepkoala