Gene detail

Detailed information of EGACTEQ4350053136-PA in Actinia equina

Genomic Location: WHPX01000489.1:686574...704664
NR annotation: XP_020905928.1, protein phosphatase 1 regulatory subunit 21 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350053136-PA

ATGAGTGCTGAGGGTCAAAACCTTCAAGCCAAGTACCAAAAGCTCGCTGCTGAGTACGCTAAGCTTAGAGCTCAAAACACTGTTCTCAAGAAGGCTGTCattgaagaacaagaaaaaacaaagaccTTACAGGAAACAGCCAAGCAAAAAGATCAATCCATCAGAAAATATGAACAAGAGATTGACAGTTTACAGTTTAGAAATGATCAGTTGTCTAAGAGAGTTGGAATACTCCAAGATGAACTGGACGAATCCGGAAGCAAAAACTGGAAATCTTGGGCCAATCCAGCTCCATCACGTTCATCTGTTGACAGTGATGTAAAAGAGGAAGAATTGAAAATTAAGATACAGGAAAATGAAAGGCTGCAAAGACAGTTGTTTGATTCATTACAAGAACACAAGGCCAGTGTGTCCAGTTTGCAAGAGAGACTTCAAGTAGCAGAAAGAAGTTCATCCAACCACCAAAAAGCAATAGATGAAGCATCAGACACCCATAGGATGGTGGTAGAGAAACTCCAAGAAGACAGGGCCTTGATGGAGgcaaaacttttcaaaactgaaGAAGTACTCAGAACTTTAACTTtaaaagcagaaaaaagCCAACAGAGGCTTAAACTCCtcaataatgaaatatctagtAAATGTGAAAATGTGTCCAAGATAGTTGCAGAGAAAATCCCCTTCAATGACACAAgTAACAAAGAACTCAACAGTTTAAATGTCCCAACACATGACAGGAAACATCAAGTTAAGTCCAAGGAATTAATAGGTTTAGCTGCAGATTTGATCAAGGAATTCACATCTGCATTGTCTAATCTACACACATACACTGAACAGAGAATCAAGATATTTTATGTAGAATCCACACAAGAGCAGTTAAGTGCTCAAACCCAAAAGTTTTGCAGCTACTTACATGAAAATGCTACAGTGCTTCGTGCAGTGGAACATTCATTCTCCTCATTCTACAAGGAGTTAAAAACAGATTCACTCATCACACTGGAGACTGTGAGTGGATTAAAGGGATTTTCTGACGCGTTTCATTCTTACGTTATGTATTTAGCAAAACTAATGCCTTATTACTTTCTGAGTACTGAAGAAGAATGCAAGAGTTCAACTTGTTCTCAAACACTAGAGGGGTATAATAGGCAAGTAGCCTTGGCAACAGCTGGTATGGTGAGGATATTCACTAAAGTGGACAGCTATGTACAGGCATTAGCCTCAGCAAGTGCAACTGGAGCTGGGCTGCTGCCTACCAACTACAATATTTGTTTTATGCAGCTGACTTGCTTTTTAGAGGAACTTCATGAGTCTATTAAAGaactttcaaaacactaTCATTCCAAGATAACACTGGAACATCAGTTACCAACAACAACACAGACATTGAAGACAACAGATGACTGCATTGTGTCGACTCTAGTGTTCCTTGTCACTGTCACAGGAAAGATTGTCAAGTTTATGAACAATAATTTAGACTTTCTGTCCAGTAAGTCAGTGCTGAGGACAAGAGGAGCTTCATTTGCTGCCGAGTCTGATCTAACCACATCTCCTGCTGTTGTGTCATTCAGACATCAAGCAGCTGATTACATCACCAAAATAACTAAGCCAAGTCACGATTCTGTACCATACCGTCTAAGCCTTCATAACCACAATGTTCTAGCCACATCAAGTGAAAGTAGGGATACACTTTCACAACAGATTACACTTAACCAAGAGAAGATGTCCAAACTAGAACAAAACAAGGAACATTGGATGCTGGAATGTCAACTTCTACAAGTCAAACATGAGAAAGAATCCAAAAAAGTTGCTTCACTTGAGAAGGAGCTTGAGAAATTAAAGTCTAGTGCATCAGCTGATCAGGGTAATAACCCGAGATCGATGTCTGTGCCACCCTCTCCTACGAGAAAAGAAGCACCCATCAAACCAACTGATCTTGGCAAAATAGTTTCAGAAGCTACAGACgagTCTTCAGATGGAATAACACGTGAACTTCTCATCAAGAATCATTTTACTAGCCGTATCAGTGATCTTACGTCTCAGCTCCAGGTAATGGACAGCAAGGGAGTATCATTTGCCGCTGAGTGCCGCTCACTTTACAAGCGAATACGACAATCAGAGAAAGACAGAGATGGGCTTTCTCAAAAGCTACTGACAGCCAATGCTAGGGTTAAACAAATTGAGGATGAACTTGACGTTACAAAGAGAAATTATGAAACACAGTTATCAATGATGAGTGAACACTTGTGTGGCATGAACGAAAAGTTGACCACACAACAAGACGAGATAGAATTATTGAAATCTGGGGGGAAAAgcaaaaagagcaaaaaataa

Transcript

EGACTEQ4350053136-PA

GgtcaatccaagatggcggccaaatAATTGGAAACAGTTTTATCGATAATTTTATGTCTTTTTAATGAGCTCTTGCTGAAAAAAATGAGTGCTGAGGGTCAAAACCTTCAAGCCAAGTACCAAAAGCTCGCTGCTGAGTACGCTAAGCTTAGAGCTCAAAACACTGTTCTCAAGAAGGCTGTCattgaagaacaagaaaaaacaaagaccTTACAGGAAACAGCCAAGCAAAAAGATCAATCCATCAGAAAATATGAACAAGAGATTGACAGTTTACAGTTTAGAAATGATCAGTTGTCTAAGAGAGTTGGAATACTCCAAGATGAACTGGACGAATCCGGAAGCAAAAACTGGAAATCTTGGGCCAATCCAGCTCCATCACGTTCATCTGTTGACAGTGATGTAAAAGAGGAAGAATTGAAAATTAAGATACAGGAAAATGAAAGGCTGCAAAGACAGTTGTTTGATTCATTACAAGAACACAAGGCCAGTGTGTCCAGTTTGCAAGAGAGACTTCAAGTAGCAGAAAGAAGTTCATCCAACCACCAAAAAGCAATAGATGAAGCATCAGACACCCATAGGATGGTGGTAGAGAAACTCCAAGAAGACAGGGCCTTGATGGAGgcaaaacttttcaaaactgaaGAAGTACTCAGAACTTTAACTTtaaaagcagaaaaaagCCAACAGAGGCTTAAACTCCtcaataatgaaatatctagtAAATGTGAAAATGTGTCCAAGATAGTTGCAGAGAAAATCCCCTTCAATGACACAAgTAACAAAGAACTCAACAGTTTAAATGTCCCAACACATGACAGGAAACATCAAGTTAAGTCCAAGGAATTAATAGGTTTAGCTGCAGATTTGATCAAGGAATTCACATCTGCATTGTCTAATCTACACACATACACTGAACAGAGAATCAAGATATTTTATGTAGAATCCACACAAGAGCAGTTAAGTGCTCAAACCCAAAAGTTTTGCAGCTACTTACATGAAAATGCTACAGTGCTTCGTGCAGTGGAACATTCATTCTCCTCATTCTACAAGGAGTTAAAAACAGATTCACTCATCACACTGGAGACTGTGAGTGGATTAAAGGGATTTTCTGACGCGTTTCATTCTTACGTTATGTATTTAGCAAAACTAATGCCTTATTACTTTCTGAGTACTGAAGAAGAATGCAAGAGTTCAACTTGTTCTCAAACACTAGAGGGGTATAATAGGCAAGTAGCCTTGGCAACAGCTGGTATGGTGAGGATATTCACTAAAGTGGACAGCTATGTACAGGCATTAGCCTCAGCAAGTGCAACTGGAGCTGGGCTGCTGCCTACCAACTACAATATTTGTTTTATGCAGCTGACTTGCTTTTTAGAGGAACTTCATGAGTCTATTAAAGaactttcaaaacactaTCATTCCAAGATAACACTGGAACATCAGTTACCAACAACAACACAGACATTGAAGACAACAGATGACTGCATTGTGTCGACTCTAGTGTTCCTTGTCACTGTCACAGGAAAGATTGTCAAGTTTATGAACAATAATTTAGACTTTCTGTCCAGTAAGTCAGTGCTGAGGACAAGAGGAGCTTCATTTGCTGCCGAGTCTGATCTAACCACATCTCCTGCTGTTGTGTCATTCAGACATCAAGCAGCTGATTACATCACCAAAATAACTAAGCCAAGTCACGATTCTGTACCATACCGTCTAAGCCTTCATAACCACAATGTTCTAGCCACATCAAGTGAAAGTAGGGATACACTTTCACAACAGATTACACTTAACCAAGAGAAGATGTCCAAACTAGAACAAAACAAGGAACATTGGATGCTGGAATGTCAACTTCTACAAGTCAAACATGAGAAAGAATCCAAAAAAGTTGCTTCACTTGAGAAGGAGCTTGAGAAATTAAAGTCTAGTGCATCAGCTGATCAGGGTAATAACCCGAGATCGATGTCTGTGCCACCCTCTCCTACGAGAAAAGAAGCACCCATCAAACCAACTGATCTTGGCAAAATAGTTTCAGAAGCTACAGACgagTCTTCAGATGGAATAACACGTGAACTTCTCATCAAGAATCATTTTACTAGCCGTATCAGTGATCTTACGTCTCAGCTCCAGGTAATGGACAGCAAGGGAGTATCATTTGCCGCTGAGTGCCGCTCACTTTACAAGCGAATACGACAATCAGAGAAAGACAGAGATGGGCTTTCTCAAAAGCTACTGACAGCCAATGCTAGGGTTAAACAAATTGAGGATGAACTTGACGTTACAAAGAGAAATTATGAAACACAGTTATCAATGATGAGTGAACACTTGTGTGGCATGAACGAAAAGTTGACCACACAACAAGACGAGATAGAATTATTGAAATCTGGGGGGAAAAgcaaaaagagcaaaaaataaTTACGAATAGAAAATGTATTCATAACATAAACAGAAGATAGAATATCTAGGTCCTTTGAAGTCGGGGACCGAATAATAATGGCAGAGATAATACCAAAATAACTAgaaaaggtttttaattcaAGGGAGTGTGAAATGGGTGCATGAGAAAACAGCTTTCTTGTGCAAAATTAGAGAGAAAATCTTAAACAAATTCAGTTAGGTTATAGCTGAAAAATTAGCTTACAGTTTTGAAAGTTTCTTACACAACAATCTGTTACTCTAAGTTTCTGAGTACGACTATAGACCAAGGTGCATTCTTGTCCAGCTTGGGTACACATATTCAACACATATTCATTTTAAATCTCGTActaaagctagaccacaatgcaactTGTCAAAAGACTATGGAGTACAAAAGTGTGACGACATCAAATTCGAAATTTTgcaattcagttttgaaattcAATATCCGCTTAATTTAACCAGCGAGCTGTAGataaagaccccttgcagcacgtctgAAAGCAGCCTAATTTGGAGGTCAA

Protein

Uniprot

Uniprot term	Description
Q6ZMI0	Protein phosphatase 1 regulatory subunit 21 OS=Homo sapiens OX=9606 GN=PPP1R21 PE=1 SV=1
Q5ZL12	Protein phosphatase 1 regulatory subunit 21 OS=Gallus gallus OX=9031 GN=PPP1R21 PE=2 SV=1
Q3TDD9	Protein phosphatase 1 regulatory subunit 21 OS=Mus musculus OX=10090 GN=Ppp1r21 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10212	PPP1R21_helical	Protein phosphatase 1 regulatory subunit 21, six-helix bundle	Domain	Interproscan
PF10205	KLRAQ	Predicted coiled-coil domain-containing protein	Coiled-coil	Interproscan
PF21636	PPP1R21_C	Protein phosphatase 1 regulatory subunit 21, C-terminal	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019348	Domain	Protein phosphatase 1 regulatory subunit 21, six-helix bundle	Interproscan
IPR019343	Domain	Protein phosphatase 1 regulatory subunit 21, N-terminal	Interproscan
IPR049372	Domain	Protein phosphatase 1 regulatory subunit 21, C-terminal	Interproscan
IPR040024	Family	Protein phosphatase 1 regulatory subunit 21	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21448	SMOOTH MUSCLE MYOSIN HEAVY CHAIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005769	Cellular Component	early endosome	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17562	PPP1R21, CCDC128, KLRAQ1; protein phosphatase 1 regulatory subunit 21	-	Protein phosphatases and associated proteins	ko01009	deepkoala