Gene detail

Detailed information of EGACTEQ4350053253-PA in Actinia equina

Genomic Location: WHPX01000063.1:17681...22656
NR annotation: XP_020911535.2, uncharacterized protein LOC110249293 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350053253-PA

ATGCCAGCTCTTGAGCGATTTGTCTTACCACCAGAAGAACTTGTCTGTTCCGTCTGTAAAGAAGTTCTTGACAGGCCTTTAGAATGCCCTTGTGAACATCACTTCTGCTATGAATGTATAGCCGAATGGATATATAACACTGGAAACTCCTCAAGTTGCCCCCTTTGTAAAAACCCTGTCAGTGTTGAGACCCTTTCTAAAGTTCCCCGTTTAATTTTAAACCTTTTGTGCTCCCTTCTGgtgtcttgttcttcttgtaaaACCCCTGTACGTCTTGACTGTCTTGAAAAACACGAGGAAAGCTGTACAAAGTACCTGGCTCAACCATGTAGTACCACGGTATCAGAAGTATTGAAAACCCCTTGTAGTGCTCCTCTATCATCTTCCGAGGAAATTCTGGCAACTCActtgatgaaaagaaaaatgaacaaCTCTACTTCATCacagataattttaaaaacaggGGGCACTCCCCTTCAACTCTCAGTTGCCAAGCAAGCCCGTGTTGGCAGTTCTACTGCTagcaaaaaaactttacaacGGAGAGCACTGGTGCTTTACAATGTTCGAAAAAACATCAGTGGTGGGTCTGACGAGGACATGAAGGCTCAACATATCCAtgatattcaaataatgaaaagatcTCATAGAGAAGAGTTAATCAAGTTGTCTGGAGTGAAGCTGTCAGTGCCACCAGGACAGGGGTTGGCCATTAAAACTGAGCTTGGGATTCCCTGGAATAAAATGCGGCACATTAGAAGGTGGTTAGACAGCTGGGGTGTCCAAATGGCTAGTGAGAAGGAGCAAAGAGTGTTatcgaaaaaacaaaaaattaaggATGTTTACTGTGAGGGAATGCCATTTCTTTTTACCAAATCAGGTGGGGGGACGGAGATACGGATGACTGAGTGTGCTATGATTCAAAATTTACATGGCCTTGTTCTTGGTTATCTTGAAGAGCACAGCAAACACAACAGCCTGACCTGGCATGATGGGCTAGTGCCAAGTGATGAAATCTGGGTAAAAGTAGGAGGTGACAAAGGAGGAGGAAGTGTTAAGATGGGCTTTGAACTGGCTAATGTTGCTAGCCCAAATTCCATCAAAAATACAGTGGTTTTTTCAATGTTTGAAGCTCCAGACTCTATTCACAATCTTGAAATTGCTTTGAAACAGTACCAGGATGATGTGACCAGTTTACAGCAAGAGACATGGAGAGACTTGtcctttaaattgtttttttatggaGATTACACTTTCCTATGCACAGTCTTTGGAATATCTGGTGCCAGTGGCAAATACTGTTGTTTGTGGTGTTTGATAACTCAAACTGAAATGCAAGAGTCACTTGATGAGAGAGGAAAGAAACCAAGCAGAACTATAGAAACTCTGAAAGAGGACAACAAAAGGTTCATAGAGGCAGGGTCAAATATCAAGAAGGCTAAAATGTTTAACAATGCAATCCGACCACCTCTATTTGATATCCCAATCGAACAGGTTTGCTTGCCTGGACTTCATATCAGCATTGGAATTTTTAATAGACTCTATGACCTACTTGTGCAAGAACTTCATACTTTAGACATCCACATTGCAAATGAAATTAGAGATGGAGAGACACTACGTATGGCCTCGGTCTCTGTTCCAGTACTACCCAATGAGGATGGTCCCTGTGTGCAAGAACTAGCAAGAGTACTCAAGAAAATAGGGGCTGAAAGACAAGCCTACCATGGAGGTAGTTTCAATGGAAATCACACAAATAAATGTCTGAAGGTTACTAGTATAGATCAACTGAAACAAATACCTATCCTGGTATGCAGTCAATTGCTGAAAAAAGATGTGATAGAAGCTGAACTAATTTCTGACAAGTTCGGACAAGTTCTTCAAACCTTTGGCAAAGTACACAGAACTCTAAATAGCTCACGAAAgcttgaagaaaatgaaatagctGAGTTAGAACAAAATGTGTCATTGTTCATGAAGCTGTATAGAGCATTTTTTCCGCATGCATCAGTCCTACCCAAAATGCATTTTTTGGAAGATCATGCCCTTGAATGGGTAAGAAGATTCAAGACAGGTCTTGGACTGCTTGGGGAACAAGGTGCAGAATCCATTCATCACGAATTTAATGAACTTTCCAGAACATATTCATGCATTAGGAACAAAGAAGAAAAGCTGAAATGTATGATAGAAGAGCATAACAGAAGATGCAACCCTGTTAATCGAGATCTAATTCCAGAaatcaaaagaagaaagaaaaaagaagaatga

Transcript

EGACTEQ4350053253-PA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06918	DUF1280	Protein of unknown function (DUF1280)	Family	Interproscan
PF00097	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR009689	Family	Protein of unknown function DUF1280	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR018957	Domain	Zinc finger, C3HC4 RING-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31424	PROTEIN CBG23806	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08443	ADGRE2, EMR2, CD312; adhesion G protein-coupled receptor E2	-	CD molecules	ko04090	deepkoala