Gene detail

Detailed information of EGACTEQ4350053764-PA in Actinia equina

Genomic Location: WHPX01000417.1:689781...691964
NR annotation: XP_031552393.1, uncharacterized protein LOC116289587, partial [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350053764-PA

atgaaattgacAGACCCATTTGAAATGGCTTTTACTTGGTCAATGAAGGGTAGCGAAAAGAATATACATTCTCTACTCATCATGGGCTCCAAGTACATCTTCTTGATAAACACACAAACTGGTACAATAATGCAGCAGTTTCATGCTCTGGAGGAAGAAACAAGATACGAACCGATGCCGCCAGTGAGCTTTGCAGACAACGAGGACCGCATTGTGGCTATAACAGACAAAGACCTAAAGATATGGACAGTAGCTGATGGCATGCTACGTCATTCTCTTGCTGTTGGTAAGATAAATACAGACGAGCAATATGGTTCCCTGGACGCTCACCAAAACTTGGCGGCTTTTTGTCTTCGAGAGAGTAAAGTGATTAAGATCTTGGACGTTCGGACCGGCAAGTACGTTCGTGAAGTACAAGTTTTTACACAAGATCAAGATCGTTTTGTTCACGAAGCCAAGATTGTCAGTAATGAGAAGTTACTAGCAGTGTCATCTTCTCTAAAATGCCTTCGCCTCTATGACCTTCATGGAGGAACCCTTTCCAAAGAAATCAAGGAATTTTCCATTAATCCTGGACTTCATCGATTACAGCTGACTACAGACCGCAGAAAGGCTTTGAGCATCGTTCAATATGAAGTTATGATTACTGACCTTGAATCTGGTGAGATAATTCAAACGTTGAAGAGCAAGTCGTTAGGAACACTTGTCATCCACACCGACCTCTTCACCAGGGATGGACGATTTGTGATATCTATTGCAAATGATAACATTCTACGCATTTACGACATAAGACGGTCTATAGAAGAAGACAAGACAGCCCAAAACATCAGTTCTTTGAAAAATGCCGCAGTGGCTTCGTCTGATACAGTAACTGGTCTGTTCCCAGGAGTTGATGGTCGTCACATCATTGCAACAGCAAACGTTCAAATGTCTTCCGAAATATCCGTGTGGGATTGCAAAAGTGGAGCCAAACTTCGAGCAATTAAATGTGGTATACCGTCAGTTCTTCCACAAGAGCTACGAATGTGCAGCCCTACGCGTGGTGTAGGTTTTATACACGATGTAAATTTATTACATTATAAGGTATTCGACTTCAAGCAAGGCAGGGTCGAGCGTTGCCTTCTAGGAAAAGCCTCGAAAAGAACAAAAGCATTTGGTTGTGTGGACGAGAATCATATCATTGCATTTTCCAGAGGAAGACGAAATTTGAAAGTTTGGAACATCAACACCGGCAAAGTGACAAAGCAATACATCTTTGGACAGAAGCACCAGTTTGAAGAAATGCTTATTAGCCAAAATGGTCGAATGGTGGTTTGCGCTCAGGTAAGCACTACTGTTGAACATTCTGAGGACAAGACGCTGCCAATTGTTGCCTTGGATACCAACACAGGTCAACACAGGTTATTGGAGATCCAGAAGAAGAGGCTATGTTTGACGTTTTCTGCTCTTTCAAGAGATGGCACGTATCTTGTTTGTCCCACTAATGATCTGAAGCCAAGGCTATGGAACCTGAAGACGGGAGAACTACTTCACAAGCTGGAAGATAAGGAATACCCCATCGCTTATGCCACAGCTATTTCAGTTCCACTTCAGCTTGCTCTGACTGCACAAAGTGATGGTAATATCAATGCATGGAAGATCGAAAGTGGACGGATCTTGCACACGTTTACTTGTGAGACGGTTGACATCATTTTGATATCTGAAGATGGTCACGTAGCGTACTCGCGATATAGATACAGAAACAGCAACATCGATGCATGGGATCTAATAAATGGAAATAAGCTGGCCACCTTTACTTCAGATTGGAAACCCGAGAGAGTAGATATAGTAGGAAATACCCTCGTTCTCGGAATGGCGGAAGCTCCCAAAGTTATGACGTTAAAACTACACTCACCGAACGATTCTGGTCATATAATTGATGACAACGGACATGTTACCTCCATATTCCATGGGATCACTGTGGATGGAATCATAAGCTCCTGCCCAGACTCCCCCTCTCTTGAAGATGGAGATAAAGATcttgatgacgatgacgataaAACAGATATCCAAAAGACCGAGCTTACCAGAAAGGCATTGCTTGCTCGACCCAATGTGATTATCGCTGGCGGCAGCTTAGTAGATTCAAAAAATGTCTTCATATCTGAATCCGTATTCAAACAAAACTTCAGTAGTTCTCGTTGA

Transcript

EGACTEQ4350053764-PA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR050505	Family	WD repeat-containing protein WDR55/POC1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44019	WD REPEAT-CONTAINING PROTEIN 55	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14548	UTP4, CIRH1A; U3 small nucleolar RNA-associated protein 4	-	Ribosome biogenesis	ko03009	deepkoala