Gene detail

Detailed information of EGACTEQ4350054543-PA in Actinia equina

Genomic Location: WHPX01001454.1:127206...130913
NR annotation: XP_020908976.2, polycomb group RING finger protein 3 isoform X2 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q07G17	Polycomb group RING finger protein 3 OS=Xenopus tropicalis OX=8364 GN=pcgf3 PE=2 SV=1
Q99NA9	Polycomb group RING finger protein 6 OS=Mus musculus OX=10090 GN=Pcgf6 PE=1 SV=1
Q9BYE7	Polycomb group RING finger protein 6 OS=Homo sapiens OX=9606 GN=PCGF6 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD\|RAWUL

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF16207	RAWUL	RAWUL domain RING finger- and WD40-associated ubiquitin-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051507	Family	Polycomb group RING finger	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR032443	Domain	RAWUL domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45893	POLYCOMB GROUP RING FINGER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0035102	Cellular Component	PRC1 complex	Interproscan
GO:0036353	Biological Process	obsolete histone H2A-K119 monoubiquitination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11488	PCGF3; polycomb group RING finger protein 3	-	Chromosome and associated proteins	ko03036	deepkoala