Detailed information of ENSAPQP00000000690.1 in Leptogorgia sarmentosa

Genomic Location: :...
NR annotation: CAB4033862.1, RNA-binding [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9PTX2Cold-inducible RNA-binding protein OS=Aquarana catesbeiana OX=8400 GN=cirbp PE=2 SV=1
Q5RC80RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1
Q14498RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050441FamilyRNA-binding motifInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR048289DomainNsCP33-like, RNA recognition motif 2Interproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48034TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0048026Biological Processpositive regulation of mRNA splicing, via spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13195CIRBP; cold-inducible RNA-binding protein-Spliceosomeko03041deepkoala

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