Gene detail

Detailed information of ENSAPQP00000000910.1 in Leptogorgia sarmentosa

Genomic Location: :...
NR annotation: CAB4015921.1, serine threonine- kinase ppk4-like [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSAPQT00000001064

ATGGAACAATGGTATTTTCACATCTCGACTGGCAAGTATTTTGATGCAGTCCACAGTTTTCAGAAATGTTTGGCGATTGCGACGAACGAATGCGACAAGAATTTGGAGGCAACGTCCAGATTAGGACTTGGAGACGTATACATGTTAACTGGAGAGAACGAACAAGCCAGGGAGTGTTATGAACAATCGTTAGACATTGCTAAGGACTCAAAATTCTGCGACATCGAAGCGTCGGCCTATTTGGGATTAGGAAATGCATGCACGGTAGTTGGGCAATCTTCGGAAGGATTCCAATATTTGGAGAAATGTTTACAACTTTCTATGGAGGTCGGAGATCGATATCATGAGTGCCAAGCATATCTTGGGCTTGGAGACGTTGATATTTCCGCAGGAAAGTATGAGAAAGCAGTAATGAACTTTGAAAAAGGATTAAGCATTGCCGTCGAGATTATGGAACGTAACTGCGAGTGCAAAGCGAGAAGAAGTTTAGCCGATGCGTACGTGTTAATTTCACCTAATAATGAAAAGCGGGCTACAGAATATTACCAGATGGCTTTGAATATCGCTGAAGAGATTGACAATGTTTATGAGAAATCTCGCAGCAATCTTGGACTAGGAAACGTACATAACTCGAGAGGAGAATATGAAGACGCATTGAAGCACTTTGAAGAAGGTTTTGCGTTTGCTGCAGCGATGAGTGGTAGAAATACAGAGAATCATGAAATCCATTTAAATACGGATCAAGTTGATTTTGGTGATCATTTCTCAATTCATTACATGAAGGGACTGCCGTTCGCACATCTGTTTGGAAACAAATGTGGAGTGTTATCAGGTTATTGGGAATTAGGAGAGTTATACCGTAAATTGAATAAGCATCACAAAGCGTTGGAACTTTTTGAAAGGTATCTTGATATTGCCGAAGAGACAAAGGATTTTCAAGCCCAAGAAGAAGCTTGCGAACGTTTGGTGGACATATACAAACGACAAGGTCGAAACTACATGGTGAAACAGTTCCAACAGAAACTACAAGTGATTGATGAAGAACGCCAAAAGGCTGGTTGTGAAAAGCCCGAAAAATGGAAATGGGTACAGAGTTCAAAAACTCATCGGAAAAAGTTCGAAATGTTGCTTAGATATGGACAGGAGCACCCAGACAAAATTAAAGTTGTCAACGGAGTACGTGTTTGTTGCTCGACGGATTTTGTCATTGGCAAAGGAGATGATGGCACTCGTGTCTATGTAGGATTAGGAATTGATGGTTACGAGAGGGCTGTAAAACGTTTGCCTAGAGATGCTATCTGTGTTGATTTGGCAGAACACGAAAAGCAAGTTTTAAACGAACTCAACACAACCCAATCTAACTACGTGGTAAATTATTGGTTCTTGGACGATAAATGCGACCAAGAATACCTATTCTTAATCTCGGATTTGTGCGAGGAAACATTGGAAGAGTTTATTGACGGTAACAGTGTGGACTATCTGTTGACCATTGCACCAAATATTATTGAGCAAATTTTGCACGGATTGGCTGATCTCCATTGCGATCCAAATCCAATTTTACATCGTGACTTGAAACCATCCAATATCTTGCGAAATGTCCATGGTAGATGGTTGCTAGCTGATTTTGGAATTAGTCGAATCTTAACGGGCGGGGCAAGCACTCATCGAAGCAAGCAGAGGGGGTCAAAGCATTGGAGAGCTGTTGAATCATGCTCGTCTGCTGGTGGACCGGTTCGTTATAAGAAAGAATCCGATATTCAGGTGGCTGGGATGGTGGCATTCTCCATTGTAACTAAAGGAAAGCATCCTTTCGGAGACGAGCCAGACCTACTTCGCAACCTAATTGATGGTAAACTAGTTGGCTTGGAAACGGTGAAAGATCCACTCTTGAATGATCTATTAGGTTGGATGCTAAGCCACGATCCCAAAGATAGACCTTCAGCTAACGAGGCCCTGAAACATCCCTATCTTCAACCTCGGAAGCAGCAGTTCGAGTTACTGTGTACAGTGGGAAATCAGCATGAGATTAAGACAAAGGACGGCACTTCagatgtcgtgaaaaaagtaaACGTGGATACAACAGATTGGCGAACTCTGATGAGTGCCGAGATTCAAAGGTATTTATGCACAGATTTTCTAAATGGAAAATCAAAAGTATTTCATTATGGGTCGTCATGGACGGAGTGTTTACGGCTTATCCGAAATGTCAATCAACACTGGCATGACCGACCACGCCCCAGACCGCAACCCGAAGCATTTTATCAAGTGGGTGATCCTCAAGAATACTTCCTTAATCTCTTCCCAAACCTCCCTGTTGAAGTGCACAAAATTGCGCGATCATCCGACTGGAAGAAACGACCGGAACTTCGGAAGTATTTTATCTGA

Transcript

ENSAPQT00000001064

CCGCTTTCCTGTAAGTGCATACCCTGTAGTATGTAGTCTGCTCAACAGCCTGAGAATtattttgcttgattttctcAAGAAAAGGTGATGTTAGAAATGTCAATCTAACTGTTAGATTGACTGCTGTGGTACACAAGAGATTTCAGAACATATGGAACAATGGTATTTTCACATCTCGACTGGCAAGTATTTTGATGCAGTCCACAGTTTTCAGAAATGTTTGGCGATTGCGACGAACGAATGCGACAAGAATTTGGAGGCAACGTCCAGATTAGGACTTGGAGACGTATACATGTTAACTGGAGAGAACGAACAAGCCAGGGAGTGTTATGAACAATCGTTAGACATTGCTAAGGACTCAAAATTCTGCGACATCGAAGCGTCGGCCTATTTGGGATTAGGAAATGCATGCACGGTAGTTGGGCAATCTTCGGAAGGATTCCAATATTTGGAGAAATGTTTACAACTTTCTATGGAGGTCGGAGATCGATATCATGAGTGCCAAGCATATCTTGGGCTTGGAGACGTTGATATTTCCGCAGGAAAGTATGAGAAAGCAGTAATGAACTTTGAAAAAGGATTAAGCATTGCCGTCGAGATTATGGAACGTAACTGCGAGTGCAAAGCGAGAAGAAGTTTAGCCGATGCGTACGTGTTAATTTCACCTAATAATGAAAAGCGGGCTACAGAATATTACCAGATGGCTTTGAATATCGCTGAAGAGATTGACAATGTTTATGAGAAATCTCGCAGCAATCTTGGACTAGGAAACGTACATAACTCGAGAGGAGAATATGAAGACGCATTGAAGCACTTTGAAGAAGGTTTTGCGTTTGCTGCAGCGATGAGTGGTAGAAATACAGAGAATCATGAAATCCATTTAAATACGGATCAAGTTGATTTTGGTGATCATTTCTCAATTCATTACATGAAGGGACTGCCGTTCGCACATCTGTTTGGAAACAAATGTGGAGTGTTATCAGGTTATTGGGAATTAGGAGAGTTATACCGTAAATTGAATAAGCATCACAAAGCGTTGGAACTTTTTGAAAGGTATCTTGATATTGCCGAAGAGACAAAGGATTTTCAAGCCCAAGAAGAAGCTTGCGAACGTTTGGTGGACATATACAAACGACAAGGTCGAAACTACATGGTGAAACAGTTCCAACAGAAACTACAAGTGATTGATGAAGAACGCCAAAAGGCTGGTTGTGAAAAGCCCGAAAAATGGAAATGGGTACAGAGTTCAAAAACTCATCGGAAAAAGTTCGAAATGTTGCTTAGATATGGACAGGAGCACCCAGACAAAATTAAAGTTGTCAACGGAGTACGTGTTTGTTGCTCGACGGATTTTGTCATTGGCAAAGGAGATGATGGCACTCGTGTCTATGTAGGATTAGGAATTGATGGTTACGAGAGGGCTGTAAAACGTTTGCCTAGAGATGCTATCTGTGTTGATTTGGCAGAACACGAAAAGCAAGTTTTAAACGAACTCAACACAACCCAATCTAACTACGTGGTAAATTATTGGTTCTTGGACGATAAATGCGACCAAGAATACCTATTCTTAATCTCGGATTTGTGCGAGGAAACATTGGAAGAGTTTATTGACGGTAACAGTGTGGACTATCTGTTGACCATTGCACCAAATATTATTGAGCAAATTTTGCACGGATTGGCTGATCTCCATTGCGATCCAAATCCAATTTTACATCGTGACTTGAAACCATCCAATATCTTGCGAAATGTCCATGGTAGATGGTTGCTAGCTGATTTTGGAATTAGTCGAATCTTAACGGGCGGGGCAAGCACTCATCGAAGCAAGCAGAGGGGGTCAAAGCATTGGAGAGCTGTTGAATCATGCTCGTCTGCTGGTGGACCGGTTCGTTATAAGAAAGAATCCGATATTCAGGTGGCTGGGATGGTGGCATTCTCCATTGTAACTAAAGGAAAGCATCCTTTCGGAGACGAGCCAGACCTACTTCGCAACCTAATTGATGGTAAACTAGTTGGCTTGGAAACGGTGAAAGATCCACTCTTGAATGATCTATTAGGTTGGATGCTAAGCCACGATCCCAAAGATAGACCTTCAGCTAACGAGGCCCTGAAACATCCCTATCTTCAACCTCGGAAGCAGCAGTTCGAGTTACTGTGTACAGTGGGAAATCAGCATGAGATTAAGACAAAGGACGGCACTTCagatgtcgtgaaaaaagtaaACGTGGATACAACAGATTGGCGAACTCTGATGAGTGCCGAGATTCAAAGGTATTTATGCACAGATTTTCTAAATGGAAAATCAAAAGTATTTCATTATGGGTCGTCATGGACGGAGTGTTTACGGCTTATCCGAAATGTCAATCAACACTGGCATGACCGACCACGCCCCAGACCGCAACCCGAAGCATTTTATCAAGTGGGTGATCCTCAAGAATACTTCCTTAATCTCTTCCCAAACCTCCCTGTTGAAGTGCACAAAATTGCGCGATCATCCGACTGGAAGAAACGACCGGAACTTCGGAAGTATTTTATCTGAACACGATCACGACACGCATGAAGTTTCTGTGAAACGCTGCTGTTTTTAAGACCCAGTTCACACGTCAAACGTTTCATGTAACGAACCCAATGATATTGGGGTTGGTTTAGGAGTAGAACTAAATTCTTTCGTAATACGTACGTAGtttaaaatgtgtgaaaacaTAATAGGAAATAATCAGTTTCAATCCTGGTGTAATTGTAAATTGTAATCaggcaaataaaatttttaaattcgcAAAA

Protein

Uniprot

Uniprot term	Description
Q54R82	Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum OX=44689 GN=mkkA PE=1 SV=2
Q5ZCI1	Mitogen-activated protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=MPK10 PE=2 SV=2
Q9SJG9	Mitogen-activated protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=MPK20 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF06479	Ribonuc_2-5A	Ribonuclease 2-5A	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR010513	Domain	KEN domain	Interproscan
IPR038357	Homologous_superfamily	KEN domain superfamily	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR045133	Family	Serine/threonine-protein kinase/endoribonuclease IRE1/2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13954	IRE1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004540	Molecular Function	RNA nuclease activity	Interproscan
GO:0006397	Biological Process	mRNA processing	Interproscan
GO:0004521	Molecular Function	RNA endonuclease activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0030968	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan
GO:0036498	Biological Process	IRE1-mediated unfolded protein response	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0070059	Biological Process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress	Interproscan
GO:1990604	Cellular Component	IRE1-TRAF2-ASK1 complex	Interproscan