Gene detail

Detailed information of ENSAPQP00000000954.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3982350.1, Tetratricopeptide repeat 28 [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

ENSAPQT00000001120

ATGAAAAGGATTTGGGCGAAATTTGCAATAAAACAACTAGAAGAAGCAGAAACATTTCTTGAGTCAGGGGATGATTGTAGacacaaaaatcaaaatcaaacgGCGATTCAACATTATGataaagccttgaaaattgcacgtaaacgaagaaataaactacaggaaacacagGCACACCTCGGGCTGGGATATGCTTACAGATctgacaatcagtatcaaacagcgattgaacactatgaaaaagccttggaaattgcaagagaacaaggatataaagaaaaggaaacacaagcataccttgggttaggagataTTTTTGGATTTGGCAATCAGTGTGAGACGGCGTTTGAACACTATGAGAAAGCCTTTacaattgcaagagaacaaggatataaactacaggaaacacaagcataccttggattaggtgatatttttaaattcgATAATCAGAATCTAAACGCAATTaagcactatgaaaaagctctgaaaattgcaaatgaacaaggatataaagaaaaggaaacacaagctcaccttgagttaggacttacgtatagacgcgacaatcagtatcaaaaggcgatcccgcactatgaaaaagccttggaaattgcaaatgaacaagaatataaagaaaaggaagcaCAAGCATACATTGAGTTAGGAGTTACgcatagactcgacaatcagtatcaaaaggcgatccaccactatgaaaaagccttgaaaattgcaaatgaacaaggatataaagaaaaggaagcaCAAGCACACAGCGAGTTAGGATATACGTATATCCTGCGGAATGAGGATCAAAGGGCGATTTCGCACTATCAAGAAGCCCTGGAAATTACAAATAAACTAAGACATGAAGAAGAGCAAGTAAAAGCACACTTTGCGTTAGGTTATGTGTATAGACttgacaatcagtatcaaaaggcgatcacgcactatgaaaaagccttgaacattgcaaatgaacaaggatataaagaaaaggaaacacaagctcaccttgagttaggacaaacgtatagactcgacaatcagtatcaaaaggcgatcccgcactataaaaaatccttgaaaattgcaaatgaacaaggatacaAAGAAAAGGAAACCTGGGCTCACCTTCAGTTAGGACAAACGTATAGACACGAGAATcggtatcaaaaggcgatcccgcactatgaaaaatgcttgaaaattgcaaatgaacaaggatataaactacaggaaacacaagcataccttgagttaggagatgcttacagactcgacaatcagtatcaaaaggcgatcccgcactatgaaaaagtcttggaaattgcaagagaacaaagATATAAACtaaaggaaacacaagcataccttgggttaggagatgcttatagactcgacaatcagtatcaaacggcgattgaacactatGAGAAAGCCTTCacaattgcaagagaacaaggatataaactacaggaaacacaagcataccgCCTTAGGTTTGGAGATATTTATAAATTCCACAATCAGAATCGATACGCGATCACGAAcgatgaaaaagccttgaacattgcaaatgaacaaggatataaagaaaaggaagcaCAAGCATACATTGAGTTAGGAGTTACgcatagactcgacaatcagtatcaaaaggcgatccaccactatgaaaaagccttgaaaattgcaaatgaacaaggatataaagaaaagcaAACACAAGCTCACCTGCAGTTAGGAcaaacgtatagactcgacaatcagtatcaaaaggcgatcccgCACTATAAAACatccttgaaaattgcaaatgaacaaggatataaagaaacggaaacacaagcacacattgAGTTAGGAcaaacgtatagactcgacaatcagtatcaaaaggcgatcccgcactatgaaatATCcctgaaaattgcaaatgaacaaggatataaactacaggaaacacaagcataccttgggttaggagatgcttatagAATCGGCAATCAGTATCAGacggcgattgaacactatGAAAAATCCTTGAAagttgcaagagaacaaggatataaagaaaaggaaacacaagcacacattgAGTTAGGAcaaacgtatagactcgacaatcagtatcaaaaagcaatcccgcactatgaaaaagccttgaaaaatgcaaatgaacaaagatataaagaaaaggaaacagaAGCATACATTGGGTTAGGAcaaacgtatagactcgagaatcagtatcaaaaggcgattgaacactttgaaaatgctttggatattgcaagagaacaaggatatagaCTACAGGAAACagaagcataccttgggttaggagaaGCTTATAGAATCGGCAATCAGTgtcaaacggcgattgaacactatgaaaaagccttggaaattgcaagagaacaaggatataaactacaggaaacacaagtataccttgggttaggagatgcttataggatcgacaatcagtatcaaacggcgattggacactatgaaaaagccttggaaattgcaagagaacaaggatataaactacaggaaacactAGTATACCTTtggttaggagatgcttataggatcgacaatcagtatcaaacggcgattgatCATTATGAaaaagctttggaaattgcaagagaagtGCATATCGACCCTATTCTGAAGGAAAAAGCTCTTGTTGGCCTGGGAATGGCCTGGTTCAATCTTGGAAATTCTCAGAAGGCAGCAAAGTCAATTCAAAGTGCTCGAGAATTTACCAGGGAGGGAACTGATAAAGATAATGGCGTTGTTGGCCTCATGGaccaaaatgaaaatttaacaaatttgcAATCGTCAGAAACACCAGATAATCCTACAGAAGGAGAAACGATTGAATTCTGTGAAAGAGATCTAAATACAGaagaGTCATGGGTGGATGCAATAGTTGAAGAAGCATGCCACCTCGACAGAACGGTGGGGTTGCCTGCTGAAGACTTGGTACGAATGGAAAAGcacatcaaaattttctcttcGTACGTGTACACTCGCCAAATATCGGTTAAGAAGCCTTTTACCGAGGAAGTTCGTAAATCCATGACAGAAAATGTTAAAACCTCAGCTTATACAAGTTTATTAGGCAAGATAGCAGAAGAGGTTCGCGTAAGGAATGCGAAATTCGCCGACGATGATCAAGAAATTTTTAACTTTGcaaaacatgaagtatttaaaaacacttcgaCTAAAAAGCCAGCAAGACTGAATGAAACTTTAGTGTCTTGCATGAGGTCCATTGGTCTGATCGGATGCGGGGAACGTCAACTTGGAACATGCTTCTTCGTAACGGACACGCTAGTGATAACAAACTATCATGTTTACAGAATGATACAAAAAGAAAGGAGTAAGCCAGGAAACTTCAACTTACCAATTAAAATTTGGCTTGACTATCTCGATCGTGAAAAACCGGGAAAAGTCGTAATAGTTGAAGTTGATGAAAGAGAGAATCCATGCAAGATTGAGAATCCATACTTGGATTACAAATTCTTTCGTGTGAAGCAAAACGAATGTCTGAACGATCGTGTTCCACTGGGCCCAATGGTTAGAAATTGGCAGTTATCAGATGGTCGGGTTGTTATTCTTGGCCACCCGGGGGGAGACGAAATGCAGGACGAAGTCTGTGTTATTGTCGGTTATCGTAAGATGTTAGACAGAATACGAAAAAGACATGAACTGTTCACGGGCGTACACATGACAAATGTCCAGTTACTGGACAGAACTGAAGACTACCAAGGCCGTCTATCATACGACAGCAGCTTTTTTTCCGGTTCTAGTGGCTCTCCTGTCTTCCAAATGAATGGAAACATCGTCGCCATGCACACACAGGGATACACATTGGAAAGAATGGAAGAAAACACTTCTAATGTTGGAAATagcgaaaatgttttcaaccaagtgcaagaaaatgttgccaatcaGCAGGGACGTTTGTCAAGGAAATATTCGTTGATGGAGTTCGGTGTCCAGTTTTTTTCCATATGTGAGGACATAAGACGCTGGCATGGGGAAGCTGTTGTTAAccaaatttttccaaattataAATGGAAACAAGGCGAAGAACCAATGAAGGTAGTCGACTAG

Transcript

ENSAPQT00000001120

CAATCAACCTACTATTCTTGGTGATCGGTAAAAACATCTGGCAGCTATTTATCCGCGATCGACGCTTGAGTTCCGCATTGGTTGGGTATTGTGTTGTTTTCCTGACGTGAAAAAGGCGCTAGTCTTTAATAAACAATGGAAAACTTTCAGAAACTATCGAACTTCACAAATGACATAGAAGACAGAAGGGAAAGAAAACAGGAAagcaaaaattaatataacaaTTATGATGAATTGACAAAACCAAAAAGCCATTCAGCAAAATGAAAAGGATTTGGGCGAAATTTGCAATAAAACAACTAGAAGAAGCAGAAACATTTCTTGAGTCAGGGGATGATTGTAGacacaaaaatcaaaatcaaacgGCGATTCAACATTATGataaagccttgaaaattgcacgtaaacgaagaaataaactacaggaaacacagGCACACCTCGGGCTGGGATATGCTTACAGATctgacaatcagtatcaaacagcgattgaacactatgaaaaagccttggaaattgcaagagaacaaggatataaagaaaaggaaacacaagcataccttgggttaggagataTTTTTGGATTTGGCAATCAGTGTGAGACGGCGTTTGAACACTATGAGAAAGCCTTTacaattgcaagagaacaaggatataaactacaggaaacacaagcataccttggattaggtgatatttttaaattcgATAATCAGAATCTAAACGCAATTaagcactatgaaaaagctctgaaaattgcaaatgaacaaggatataaagaaaaggaaacacaagctcaccttgagttaggacttacgtatagacgcgacaatcagtatcaaaaggcgatcccgcactatgaaaaagccttggaaattgcaaatgaacaagaatataaagaaaaggaagcaCAAGCATACATTGAGTTAGGAGTTACgcatagactcgacaatcagtatcaaaaggcgatccaccactatgaaaaagccttgaaaattgcaaatgaacaaggatataaagaaaaggaagcaCAAGCACACAGCGAGTTAGGATATACGTATATCCTGCGGAATGAGGATCAAAGGGCGATTTCGCACTATCAAGAAGCCCTGGAAATTACAAATAAACTAAGACATGAAGAAGAGCAAGTAAAAGCACACTTTGCGTTAGGTTATGTGTATAGACttgacaatcagtatcaaaaggcgatcacgcactatgaaaaagccttgaacattgcaaatgaacaaggatataaagaaaaggaaacacaagctcaccttgagttaggacaaacgtatagactcgacaatcagtatcaaaaggcgatcccgcactataaaaaatccttgaaaattgcaaatgaacaaggatacaAAGAAAAGGAAACCTGGGCTCACCTTCAGTTAGGACAAACGTATAGACACGAGAATcggtatcaaaaggcgatcccgcactatgaaaaatgcttgaaaattgcaaatgaacaaggatataaactacaggaaacacaagcataccttgagttaggagatgcttacagactcgacaatcagtatcaaaaggcgatcccgcactatgaaaaagtcttggaaattgcaagagaacaaagATATAAACtaaaggaaacacaagcataccttgggttaggagatgcttatagactcgacaatcagtatcaaacggcgattgaacactatGAGAAAGCCTTCacaattgcaagagaacaaggatataaactacaggaaacacaagcataccgCCTTAGGTTTGGAGATATTTATAAATTCCACAATCAGAATCGATACGCGATCACGAAcgatgaaaaagccttgaacattgcaaatgaacaaggatataaagaaaaggaagcaCAAGCATACATTGAGTTAGGAGTTACgcatagactcgacaatcagtatcaaaaggcgatccaccactatgaaaaagccttgaaaattgcaaatgaacaaggatataaagaaaagcaAACACAAGCTCACCTGCAGTTAGGAcaaacgtatagactcgacaatcagtatcaaaaggcgatcccgCACTATAAAACatccttgaaaattgcaaatgaacaaggatataaagaaacggaaacacaagcacacattgAGTTAGGAcaaacgtatagactcgacaatcagtatcaaaaggcgatcccgcactatgaaatATCcctgaaaattgcaaatgaacaaggatataaactacaggaaacacaagcataccttgggttaggagatgcttatagAATCGGCAATCAGTATCAGacggcgattgaacactatGAAAAATCCTTGAAagttgcaagagaacaaggatataaagaaaaggaaacacaagcacacattgAGTTAGGAcaaacgtatagactcgacaatcagtatcaaaaagcaatcccgcactatgaaaaagccttgaaaaatgcaaatgaacaaagatataaagaaaaggaaacagaAGCATACATTGGGTTAGGAcaaacgtatagactcgagaatcagtatcaaaaggcgattgaacactttgaaaatgctttggatattgcaagagaacaaggatatagaCTACAGGAAACagaagcataccttgggttaggagaaGCTTATAGAATCGGCAATCAGTgtcaaacggcgattgaacactatgaaaaagccttggaaattgcaagagaacaaggatataaactacaggaaacacaagtataccttgggttaggagatgcttataggatcgacaatcagtatcaaacggcgattggacactatgaaaaagccttggaaattgcaagagaacaaggatataaactacaggaaacactAGTATACCTTtggttaggagatgcttataggatcgacaatcagtatcaaacggcgattgatCATTATGAaaaagctttggaaattgcaagagaagtGCATATCGACCCTATTCTGAAGGAAAAAGCTCTTGTTGGCCTGGGAATGGCCTGGTTCAATCTTGGAAATTCTCAGAAGGCAGCAAAGTCAATTCAAAGTGCTCGAGAATTTACCAGGGAGGGAACTGATAAAGATAATGGCGTTGTTGGCCTCATGGaccaaaatgaaaatttaacaaatttgcAATCGTCAGAAACACCAGATAATCCTACAGAAGGAGAAACGATTGAATTCTGTGAAAGAGATCTAAATACAGaagaGTCATGGGTGGATGCAATAGTTGAAGAAGCATGCCACCTCGACAGAACGGTGGGGTTGCCTGCTGAAGACTTGGTACGAATGGAAAAGcacatcaaaattttctcttcGTACGTGTACACTCGCCAAATATCGGTTAAGAAGCCTTTTACCGAGGAAGTTCGTAAATCCATGACAGAAAATGTTAAAACCTCAGCTTATACAAGTTTATTAGGCAAGATAGCAGAAGAGGTTCGCGTAAGGAATGCGAAATTCGCCGACGATGATCAAGAAATTTTTAACTTTGcaaaacatgaagtatttaaaaacacttcgaCTAAAAAGCCAGCAAGACTGAATGAAACTTTAGTGTCTTGCATGAGGTCCATTGGTCTGATCGGATGCGGGGAACGTCAACTTGGAACATGCTTCTTCGTAACGGACACGCTAGTGATAACAAACTATCATGTTTACAGAATGATACAAAAAGAAAGGAGTAAGCCAGGAAACTTCAACTTACCAATTAAAATTTGGCTTGACTATCTCGATCGTGAAAAACCGGGAAAAGTCGTAATAGTTGAAGTTGATGAAAGAGAGAATCCATGCAAGATTGAGAATCCATACTTGGATTACAAATTCTTTCGTGTGAAGCAAAACGAATGTCTGAACGATCGTGTTCCACTGGGCCCAATGGTTAGAAATTGGCAGTTATCAGATGGTCGGGTTGTTATTCTTGGCCACCCGGGGGGAGACGAAATGCAGGACGAAGTCTGTGTTATTGTCGGTTATCGTAAGATGTTAGACAGAATACGAAAAAGACATGAACTGTTCACGGGCGTACACATGACAAATGTCCAGTTACTGGACAGAACTGAAGACTACCAAGGCCGTCTATCATACGACAGCAGCTTTTTTTCCGGTTCTAGTGGCTCTCCTGTCTTCCAAATGAATGGAAACATCGTCGCCATGCACACACAGGGATACACATTGGAAAGAATGGAAGAAAACACTTCTAATGTTGGAAATagcgaaaatgttttcaaccaagtgcaagaaaatgttgccaatcaGCAGGGACGTTTGTCAAGGAAATATTCGTTGATGGAGTTCGGTGTCCAGTTTTTTTCCATATGTGAGGACATAAGACGCTGGCATGGGGAAGCTGTTGTTAAccaaatttttccaaattataAATGGAAACAAGGCGAAGAACCAATGAAGGTAGTCGACTAGATTTCTTATGCAATCACTGAAAATGAATGTGATCTCGAAAGATTTGTAGCTATGTATACAATTTAATTTGCAAGTAATTCAGCAGGATATTATACTGTTTCGAGAACGATTATTATTGATGGAATTTTATCCATAATATATAACACAGGCAAATTACAAGACACTATAAACAAGCCATACCGTTTCAAATTCTCGACTGGACTTTCCcctttttaaacaaatttttgaattaaagaaaaataattaccACAGCTAGAAAGAGCATCACAGGTTTGGTAAGATAGTGAAGTTTGAGAAAAATACAGTGATGTGAAGTtttcgaattttgtatacttttgtattattatatacatgctGCTGTGTGTGCGGCAAAGTGAGaatcacattcgaaatatGATTACCACTTTTAATTTCGAatccgtgcgtaatacaaaggTATACATCGTAAGGGTAAAGGTCCATTGAATTTATATTAAGATTTATGCACGTCATCTTCAAGTACAcacttttcaatttaaatttacaaGCGCACATATTCGTGATTCACTTAATGCAAAGTGTGTAGAAAAGCGCGCTCTTGTAATTCCTGAAATAACAGGCAACGCCAAGgtcattaattaaaataaacgaTTGTAATGTTAGCTGAACAGTAGGCTTTTTCAAATAGGAAGACGAACGAGTCGTCTACACGAATATACCGTCGTCGAACCAATTATCTGATGAGAAATCGAATCGGACAATTCTTCCTTTGcatattatgacgtcataatctgccattgggcgccatcttggttgacaccTCGAAGTTTATTTCAGCTATTACAGCGAATAAAATCAGCTATTTCACCGTTTCTTGATGATTTTTGAAACTGAAAACCATGCCCAACGCATTATGACATTTTGAATATGTGTTCGTGTCGAATGCTTGTTCTGTTGTGCACGTGTTTAGAAATGCCAACCAAGATGGCGACCAATTGCAAACCACCTATTTTTCAGACG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9D2L9	Serine protease FAM111A OS=Mus musculus OX=10090 GN=Fam111a PE=2 SV=1
Q96PZ2	Serine protease FAM111A OS=Homo sapiens OX=9606 GN=FAM111A PE=1 SV=2
Q6SJ93	Serine protease FAM111B OS=Homo sapiens OX=9606 GN=FAM111B PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005664 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF13365 all species →	Trypsin_2	Trypsin-like peptidase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR009003 all species →	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR043504 all species →	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan
IPR051476 all species →	Family	Bacterial Response Regulator Aspartate Phosphatase	Interproscan
IPR006597 all species →	Repeat	Sel1-like repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46630 all species →	TETRATRICOPEPTIDE REPEAT PROTEIN 29	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003341 all species →	Biological Process	cilium movement	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07126	K07126; uncharacterized protein	-	Function unknown	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.