Gene detail

Detailed information of ENSAPQP00000001299.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028407692.1, ATP-binding cassette sub-family F member 1-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000001511

ATTctcattaaaattattttacgtTTACCCTTCTGCCAGAAGTCTTCACAATGGGCAAGAAGAAGTCTTCGGCGAGTAAGAAACAGCAATCTTTAGCGGCTGCAGTTCAAGAAGCTGAACAAGAAGTCGATGAATTAAAATTGGACGATGATACGAAGGACGAAGGTGCTGGAAAGACGAAGAACgcaaaaaagaaagaagaagcaAAGAAAGGGAAAGCTGAGGGGAGAGTTGAAGAAGaagaatttgaatttgattatACTGGTGGGGAAAATATGCCAGAGGAAAATGAGAAAGAAGAGCAAGATGTAAAGCAATTAAGTCGGAAAgaattgaaaaagttgaagaaaCAGgaaaaatatttacaagaaGCGAAGGAAATTGAGGATTCTCAGTTCTCTGTTTCTCAACGTGAACCCAGTGGCAAAGGAAATGTTGTAGAAAATGCTTCAGACATCAAGATTGAAAAATTTGGCATATCAGCTCGTGGGAAAGATTTGTTTGTGAATGCTACATTGCAAATAGCTGCTGGCCGACGTTATGGCCTCGTTGGTCCAAATGGAATGGGAAAGACGACACTATTGAGTCATATTGCTAAGAGGATTCTTGCCATCCCACCAAATATTGATGTGTTGCTCTGTGAACAAGATGTCGAAGCTGACAATACTGCAGCTTTTGATGCCGTGCTCAAAGCTGATACAAAAAGACTGGCTTTGTTGGAAGAAGAGAAGAAACTGACAGAGCAGAGCGCAGCAGGTGATGAAGGTGCAATGACAAGGCTGAAAGAGGTGTATATAGAACTGGAAGCCATTGGCGCAGCTTCTGCTGAAAGTCGAGCAAGACGCATCTTGGCAGGTCTCGGCTTTACAACAGAAATGCAACAACGTCCAACAATCCAGTTTTCAGGTGGATGGCGTATGAGAGTTTCGTTGGCAAGGGCGTTGTTTATGGAACCCACTTTGTTAATGCTTGACGAACCTACAAATCATTTGGATTTGAATGCTGTGATTTGGCTGGACAACTATCTTCAGCAATGGAAGAAAACTTTACTGATTGTTTCTCATGACCAGCATTTTCTGGACAGTATTTGTACAGACATTATTCATTTAAATGAACAGAAATTATTTTACTACAGAGGAAATTACAGTCAATTTAAGAAAATGTATCAGCAAAAACTAAGAGAGCAAGAAAAAGCCTATAAAAGACAAGAGAAGCAAATTAAAGAGTTAAAAACAGGCGGGAAATCCAAGAAACAAGCTGTTGAAGATGCTAAAGCCACtcagaaaagaaaaaatgaaaaaggtGGCGGCAAGAAAGCAACGCAAGAAGATGCGatgGAGGCTGAAACCGTTGAATTAATCAAAAAACCCAAAGAGTATGTGGTCAGGTTTTCATTTCCAAATCCTCCGCCACTCAATCCTCCAATTTTGGGTCTGAAAGAAGTCACATTCGGCTATCCAAAGCAACCGAATTTGTTTATCAATTTGGATTTCGGAATTGATCTCAGCTCACGAGTCGCTGTTGTTGGAAACAACGGAGTTGGGAAAAGTACCTTCCTTAAATTATTGATTGGTGAACTTGATATGGGTCAGGGAGAGCTGATCAAGAACCATCGTGTGCGGATTGGATTTTACAGTCAACACGCTGCTGATCAGTTGAAATTGGAAGAGTCTTCGGTGGAGTACTTGCAGCggaaatataatttaaattatCAAGAGTCAAGAAAGACGCTAGGCCAATACGGCCTCAGTGGACACGCGCATACCATAAAGATTAAAGATCTTTCAGGAGGACAGAAATCTCGTGTGGCCTTTGCAGATCTTGCGCTAAGTAATCCTGACGTTATCATCTTGGATGAACCTACAAACAACTTGGATATCGAATCAATTGATGCTTTAGCTGAGGCTATCAACAAATACACTGGAGGTGGTCTAGGTCACCAGGTGGTGTGCAAAAGTTAACATTGAAGGAAAACGGCCAAAGATTTTGTGGAATTATAGAAGAATAGACCCGATTGTACTTGGATATCTAAACTATCTGGTGGTCTGTTTCTACCAAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8NE71	ATP-binding cassette sub-family F member 1 OS=Homo sapiens OX=9606 GN=ABCF1 PE=1 SV=2
Q767L0	ATP-binding cassette sub-family F member 1 OS=Sus scrofa OX=9823 GN=ABCF1 PE=3 SV=1
Q6P542	ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001001 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF12848 all species →	ABC_tran_Xtn	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR050611 all species →	Family	ATP-binding cassette sub-family F member, EF3 subfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032781 all species →	Domain	ABC-transporter extension domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19211 all species →	ATP-BINDING TRANSPORT PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000001299.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.