Gene detail

Detailed information of ENSAPQP00000001917.1 in Leptogorgia sarmentosa

Genomic Location: chr10:7414431...7419422
NR annotation: XP_028398163.1, dynamin-1-like protein [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSAPQT00000002217

atggagCAGTTAATTCCTGTTATTAATAAACTTcaagacgtattcaatactgtTGGCACTGAAGCTGTTCAACTGCCACAAATCGTAGTTGTTGGTACACAGAGCAGCGGGAAAAGTTCTGTATTAGAAGGAATTGTTGGCAGAGATTTCTTGCCAAGAGGTCCTGGTATTGTCACACGAAGACCATTGATCCTACAGCTTGTCTATTCCCCTTCACGTTGGAAGAAAAACAGGAAAAGTGAAAGCGATGGTAGTGGTGATGAGTCGCCTGAGCTTGAGGAGGTTGAGCCAGAGGAGTGGGGCAAGTTCAGTCACATCAAAGACAAGAAATTTGCAGACTTCTATGAAATCAGAGATGAGATAGAAAGGGAGACTGAACGATTAACTGGCCATAACAAGGGTATATCAAGTGAACCTATTATATTAAGAATTTATTCACCAAAAGTAGTCAATTTAACACTTGTTGATCTGCCTGGGATCACTAAGGTTCCTGTGGGTGACCAGCCATTAGATATTGAAAATCAGATGAGAAATCTTGTCCTACAGTACATCCGTAATCCCAACAGTATTATCCTGGCTGTAACTCCAGCTAATACAGACATGGCCACATCAGAGTCCATTAAGATTGCAAAAGAAGTTGATCCTGATGGCAACCGTACCATTGCTGTATGTACTAAGCTTGACCTTATGGACCCAGGAACTGACGCTTTAGATATTTTATATGGAAGAGGTAATCTTATTACAATACAGCTATACGCATTCTGCTACgcgtttgtttttgtttctgCTGAAGCTCTCACAGATGAACATCAGTTCTTTCAACAACATTATCCTGCCCTCGCAGCCAAAAATGGAACCAAGTTTTTAGCTCGATCGTTAAATAAGCTCTTAATGTTTCATATTCGGAACTGTCTACCTGAACTCAAGTCTCGAGTGAATATGATGATTTCTCAGTATCAACAACTCTTGCTGTCATATGGGGAACCCGTCGTGGATAAGGGTCCTACATTACTCCAACTGGTCACGAAATTTGCCTCGACGTATTGTTCCATTATTGAGGGGAGCGCtaaagaaattgaagtctCTGAGTTATGTGGCGGTGCAAGAATATGTTACATATTTCATGACATCTTCGGCAAGACTTTGCGCAGTATGGACGCTTTAGGCGGGCTATCAACTCGAGATATTCTTACTGCAATACGGAATGCAACGGGTCCGAGGCCAGCGCTGTTTGTGCCAGAAATTTCTTTCGAACTTTTGGTCAAACGACAAATTCGTCGCCTCGAAGACCCAGGACTGCGGTGCGTGGAGCTTGTCCACGAGGAGATGCAGCGTATTATTCAACACTCGTTTGCCCACGTGTTAGAAATTCAAAGGTTTCCTGCCCTTCATAACCGGATAGTGGAAGTTGTTTCTGACGTTCTGTACAAGAGATTGAAACCAACAAATGACATGGTTGAAAACTTGGTGAAGATCGAGCTTGCGTACATCAACACAAACCATCCTGATTTCACTGATGGCTGCCATGTCTCTTGCTTTTCCAGCCAAGACCTTCTTCGTTTATCGTCAACAAGTTCTGCCTCGAATCCAAATCCATCAGAACAATTTTCGTCTGGATTGATGTCCTGGGTTCCAGGTTTAAAACGAGAAGCAAGAAGTAGCGTTCCAGGACCAAGTCAGCGCTTTGTTCAACACACTTGTATAcgtaaaaaaatatatcatgCATGGTTTTTACTTTTCTTTACAACGAACTTTTGTTTATTCAGCATTCCAAAAGCCGTTATGTGTTTTCTTGTAAACTACGTAAAAGAAAGAATTCAAAGTGAACTGGTTGAAAAACTTTATAAGACTGAAGAGTTTAATCAGTTGCTGGAGGAGTCTGATGATATCCATAGACGCAGACAAGAAGCATCGGAAATGCTAAAGGTATTAAAAACCCATCCATTTCAACCTTCAATTCACCATGCCATAAACTTTGGAGTCTGGGCACTGTcagcctcgttcccaggacACACTTCAGTAAGTAAGATTGTTGCATTGATCTTTTTTCCGTATCTTATCTTAGGCTCTACAGAAAGCCGGTCAAATAATTGGAGAGGTGAGAGATTCCCAACTATGGTGAAACGAAGACCAGTGGTATTAGGATATAATTTAACAATTAATGTACAATAA

Transcript

ENSAPQT00000002217

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7SXN5	Dynamin-1-like protein OS=Danio rerio OX=7955 GN=dnm1l PE=2 SV=1
O00429	Dynamin-1-like protein OS=Homo sapiens OX=9606 GN=DNM1L PE=1 SV=2
Q8K1M6	Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001302 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00350 all species →	Dynamin_N	Dynamin family	Domain	Interproscan
PF01031 all species →	Dynamin_M	Dynamin central region	Family	Interproscan
PF02212 all species →	GED	Dynamin GTPase effector domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001401 all species →	Domain	Dynamin, GTPase domain	Interproscan
IPR045063 all species →	Domain	Dynamin, N-terminal	Interproscan
IPR020850 all species →	Domain	GTPase effector domain	Interproscan
IPR003130 all species →	Domain	Dynamin GTPase effector	Interproscan
IPR022812 all species →	Family	Dynamin	Interproscan
IPR000375 all species →	Domain	Dynamin stalk domain	Interproscan
IPR030381 all species →	Domain	Dynamin-type guanine nucleotide-binding (G) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11566 all species →	DYNAMIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0000266 all species →	Biological Process	mitochondrial fission	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005874 all species →	Cellular Component	microtubule	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000001917.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.