Gene detail

Detailed information of ENSAPQP00000001919.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4012189.1, sorting nexin-5-like [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000002220

GTAAAGCATATTGCTCCAAGGTTTGTGCATAAGGCATGGGAACATCTGCTCCTGTCACTCGAAGTACTGGTGCATCCAGGTAGTGAAACCCTTCACCTAAAGAAACACACAACATGGAGTCATCATTACAGAAAACCTCGAAAGTTGTCAACATTTTTCACAACAGCAAAGTCTACCTGGATCAGGATCTCGCACTGCTGCCTTGAGCAAGCCTTTGGCGTCTTCAGCAGAGTATGGTGACAAAACCTAGCAGACCAAGATTGgaaaaagtgaaatattgtaTCGTTAATGTGTTCAAAATGATGAACGCTGAAAATGACGAGACAGCGACCTCGGGCGAGTTCAAACCTGAGCAAGATGAGGAAGTAGGGAAGCAAAGCAAGGATGTTGTACTGGTTGCAAACGTTATTGAAGCAAGTAAAGATGGTGAAGTTGTCAAGTATACTATACAGACAAAAGAGATCAGGACTGGTGAAGAAAGTGACGAACGAGGTCATATTGTTGTCAGAGAATTTGAAGATTTTGTATGGCTTGATCATTGTTTAAAAACACAGAATGATATCTCTGGAGTTATTGTTCCACCCTTGATGGGCAAACACCATGTCACAGCTGTCGCTGCTGAGAATAAATCAAAGAAGCAACTTGgcaataaaacaaaaagtatGCTTGGAGATGAATTTACAAAGGAATGCCGAAGTCTAGAAAAGTACATTCAGTTACTCTTGGTTCACTCTGTGTTTTGTGCtgatgaaaatttgaaaaagtttttgaTTGAAGAAGAGCTTCCAGCGAGGGTTAAAGTGAAAAAGGGAATTCTAAACAGTTTATCAAAAACAGTTGATGAAGTTCGGTTCAGCTCCCATAAAGATATTAATGATGAATTTCAAAGTCGAAGAGATTTTGTGAATAAATACAGTACAGACATAAAGTCTTGTTCAGAGGCTTTTACAAAGATGGTCAGTTCCCAGTTTAAGGTGGCGTCTGATCTGGGTTGCTTTGCGACTACAGTCTCCAACAGTATCACTGATGGAGTGAACTCCAGACAATTGAACAGCTATCTACTTGAATTGTCCACATGCTTAGAGAAGTCTAGGGAATCGCAAACTGTAATGGCAATAAATGATGACAAAACATTGGGATTTACCGTAGAACTATATGCAAACTATATGGACAGTGTCAAGAGCATGTTTTTACAACGTACACAAAAACTTGTGAAGTTAGAGGGTGCACAGAAAGCGTTGCAGAAAGCAAAACCACAGAATCAAGAAGAGCTGGAAAAGGCCAAAAATACAGCAGAAGAAGACTTCAAAGACATTtcagaaaaatgtgaaaaagagTTTTCAAGATTTCAACGGCAACGTGTCCTGACTTTCCAGTCGAGTTTGACAAAATTCACTGAAGCACACATATCAAATGCCAGGGACACCTATGCTATCATGGCAAAATTATTGTCTGATGTTAAATCACTTTGATTCAAAACTTTAAATATCACTATTTATGATAATTTCATGATCACAAATCAAAGAGCTGTTAGTCCTAACACTCTTTGGTCAAATTGAGGAACTATGATGGAAACAGAAGTACAGGGGATtgatttttaaatgaaatcaGAAAATTTATTAGTATAATTGAATGCCATAATTTAAGCAGAGTAATCTTAGGATTTTCGATCACATCGGGTATGCGGACAGACAACAGATTGAGTGAAATGATGTAGGTTTAATGTTTACTTTAGACGATTTAAATACAAGTCATTTTCCAAGTTGATTTTATAAAAAGTCCTAACACacagttttaaaataattttataatacttCGGATTGTCCAATATTCCTAGCACTGCACAGAGATTGTTCACTGTGAGTGCAAGGGAATCAAGTGTTCAGACATGATTATTGCTGGGCTTGTTGCGCTGCAAGTTTTCTTTTGAGGCTTTCTGGCATTTCAGGGGGTGGTGGTCTTGGCAGTCGGAAGAAAACTTTAACAGAGTCGTAGATGAACCATTGAGCAGCAGTAAGAGTACCAATCATAAGGATACGTGGACCCAGACCTTTCCATAAAcctggaagcaacagaagtgTGGTGATCAGAATTCATGCCTTGGAACTTGACTACATGGCAAAATATTGTACCTTTCATGCCCAGTTCTTTTGCAGCTTGTACTGGAGAACTTCCAACATCGTTATTGAGTTTGGACACGACAGTATCAGCAGGGTGAGAGACAACAGCACAGAATACACCAGCTACAAGGAAATGAAATGTGTTCTTAAACAAGAAAAGACACTTGAAAATGATCGTGGTAAAGACATCGACACTTCATGTTGCTGGACAGCCATTTCTTCATCCCTTACCAATATATCCAGCAATGAAAGTCACTACCAATTGCTCTCCCTTGGTACATTCATTCCTGAAGAGTTGAACATATTAACAGTCAATTTGGAATTCTAAAGAGATTTCTATCAAATTTCACA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004441 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09325 all species →	Vps5	Vps5 C terminal like	Domain	Interproscan
PF00787 all species →	PX	PX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR015404 all species →	Domain	Sorting nexin/Vps5-like, C-terminal	Interproscan
IPR036871 all species →	Homologous_superfamily	PX domain superfamily	Interproscan
IPR001683 all species →	Domain	Phox homology	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45850 all species →	SORTING NEXIN FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17920	SNX5_6_32; sorting nexin-5/6/32	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.