Gene detail

Detailed information of ENSAPQP00000002328.1 in Leptogorgia sarmentosa

Genomic Location: :...
NR annotation: CAB3978860.1, DNA mismatch repair Msh2-like [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSAPQT00000002703

aaatgttcgtTTTTTGGGTCGGTAAATATTAAACTGCATTTTAGAGACGGAAATGTGACAATTGCCAACGTTTTTGCAGTCAGTAGGGTGTTATGGAGGTCATTGTTAATTTTATTGAATTTTGTCTTTATAGTCGCTGAGTTCATCAACAAAATATGTTTGATAAAAGAACATGCAGCAACACAATTACTCCAGGCGGTTGAAACCTTCAGGAAAAAagggaatgaaattaaaaaagaaagCTGCAGTGTGTTGAGTAGTGTAACTGAGTCATGGGAGGCGTTATTGACTGATACTGAAGATGAAGCAAAGGAAATGCTGGAACTTTCTCAGAAACTTGTGAACAGCATCAGTGTTCCATTGTTTGACCGTgcatcaaagaaaaaaattctccTCAAGAAGGTGTTCTCAAATCGTGAAAGCCTGGAAGCTCAAGCTGATAAAACAGAAGAAATTCTCACTAAGTGCTTTAAAGATTACACAGATTCCTGGAGCAAATACAAACTATATTCCAAAGACCCACAGAAGGAGCAACATGTGTCGACAATCTGCTACAATTGCCACAATGATTATGTTTGGAAACTTTCTGGcttcaacaaaacaaatgaaacatTGTACGAAACAATCATTCCAGAACTGTTGACAGATGCTCAGGAAACATTGAATGACATTGGCAATTCCTACTCCACTCTTATGCAGCAATTCACACAAACACATCAAGAAAAGCTGAACAAACGTCTAGGAAAACTACACTCCATTGGACAAATATTTGCCTCAGTAAATGTTGACTCTGATATTTGTCAGTATGTGCAGTCACTCGGTGCTGGCAGAGTGAAAATTCTTGTCAAGTCACATGAGAACCCAGATGAAATGACAACCACTGACGTTCTTGGTGTGAAAATGTTACTAAACCCTTTGACAGAACCTGCTctgaagagaaaatattaCTTGATGAACCAAAAGGTTTCTGAGTTTGTGAATCAAGTTGATAAAGAACAGACTGCGTTACGATCGCTTAAGCAACTGAAATACAGTTACATTGATAATCCCTCGTACGGCAATCCTGATGGAATGTGTGAAGACATCAtgaagaatgattttgaattaAAACGAAAACGAGTGCAGCTTTCTGTTCTATCTACACAGTTGAGTCTGTTCACGAAGGACATGATACAAGACATGGGTCCCATGGAAAGTGCACAAGATGGAGGAGAGGACAGTGACAGTGAGGGATATACGACGGTAGACAGGGATAATGAAAGAGTTCAAACTGCTCATCAATTTGTGCCTTACATCGCAAGAAAACCTGGCTTATGTGCTTACTGCAAAGGCGTTCTAATTGGAATCGTGAAGCCGACAGTTCGTTGCAAGGTTTGCAAACAGATCGTACATCAACGATGTGAAATGAACGTTCCCTACTGTTCTGGCGCTCCACAGCAGATGCGCCCACTCTCAAAACTCCTGGCCATCAGATCCAAATCTATCGACTCTCGGAATTCGAAcgttgatgatgaagatgatgaggATAATCACCTGTACTCGGACATCGACAGCACTCAAGCTTTGCCCAAAGCAAGAAGACGCAGACACAGTGGAAGTAGTGCTGAAGGACGAGCTGTCTTTGTCAATGGAAGCTACGGTTCGTCTCCAAGTTTAGTGCCTTCCCCGCCCGAGGTTCCCAACAAACCAGTTCTAAAGAAGAAGCCTCAGCAATGTGTGATTCTCTACGACTACGACGCGAATTCTCCTGGAGATCTCGGTATCAAGGCTGGACAAAGAGTAACGTTGATGAACAGTTCATCTGCCGACTGGTGGGAGGGTTCTTACAAAGGCAAGTCTGGATTCTTCCCTGCATCCTACGCCTTGAAACTTCAAGACAAGGATGTTGTTCTTAAATGTTTATACGATTTCGATGGCGAGGAAGAGGACGAACTTTCTATCACTGAGGGACAGATACTGTTACTGGTGGAAGATGAAGGTAATGGTTGGATGGTTGGACGAGGGGTGGATGGTGAAGGAATATTTCCTTCAACTTACGTTGAGAAACACACTGGAAGATAG

Transcript

ENSAPQT00000002703

Protein

Uniprot

Uniprot term	Description
Q5HYK7	SH3 domain-containing protein 19 OS=Homo sapiens OX=9606 GN=SH3D19 PE=1 SV=2
Q91X43	SH3 domain-containing protein 19 OS=Mus musculus OX=10090 GN=Sh3d19 PE=1 SV=2
Q9P7E8	Protein app1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=app1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018	SH3_1	SH3 domain	Domain	Interproscan
PF00130	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR027267	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR046349	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR002219	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15735	FCH AND DOUBLE SH3 DOMAINS PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23712	STAC2; SH3 and cysteine-rich domain-containing protein 2	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala