Gene detail

Detailed information of ENSAPQP00000002405.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3996867.1, mitochondrial-processing peptidase subunit alpha-like [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

ENSAPQT00000002800

ATGAGCATTAGTAACTTCGACTTCCCTTACTGCCATGAAGTTACAAAATACGAGAGATTGCTCAAAATTGGCCAAGGAACTTTTGGTGAGGTTTTCAAAGCGCAGGAGAGAAAAGGGTCACGCCGTCTTGTGGCACTCAAGAAGGTGATGATGGACAATGAGAAAGAAGGGTTTCCAATCACAGCTCTGCGAGAAATTAAAATCCTGCAGCTTCTTAACCATGACAACATTGTTAATCTCATTGAAATATGTCGAACTAAAGCTTCGCCCTATAATCGCAACAAAATTAAGAAAATTGCTCAGATGTTAATGAATGCCTTGTACTTCATACACAGCAACAAGATATTACACAGAGACATGAAAGCCTCCAATGTTTTGATCACCAAATCAGGAGTATTAAAACTCGCTGATTTTGGCCTTGCCAGAGCAATTCACATTAGCGAGGAAAAGCAACGTTACACCAACCGTGTTGTAACACTGTGGTGTCGGCCTCCGGAGTTACTCCTTGGAGAACGCGACTATGGCCCACCTATAGATATCTGGGGCGCGGGGTGTATTATTGCTGAGATGTGGACACGGACCCCTATAATGCAAGGCAGTACAGAGCAACATCAGCTCACATTAATCAGTCACTTGTGTGGGTCAATTTCCCCCGAGGTTTGGCCAGGTGTTGATCAGTTGGAGTTGTATTCGAAAATGACCTTGGCTCAAGCGCAGAAGCGCAGAGTAAAGGAGAGATTAAAGAGTTACGTCGGTGATGCAAATGCGTTAGATCTTATTGATAAGATGTTGTGTCTTGATCCGAAGCAACGTCTTGATAGTGATGCAGCTCTTAACCATGACTTCTTTTGGACGGATCCGATGCCTTGCGATATCTCGCGAACCTTGGCACGTCACAATACATCAATGTTTGAGTACCTTGCCCCACCGCGCAGACCTGCTGAGCGCATGGCGGCTGCGAATCGACTCCGGGACGCTGGTTCTTATGAAACAAGGATCACCACGTTAGAGAATGGCTTAAAAGTTGCGTCTGAGGAGAGTTTTGGACAGTTTTCTACTGTTGGAGTTCTCATTGATGCTGGTTCTCGTTATGAAGTTGATCATCCCAGTGGAGTGTCTCATGTCATTGAGAAAATAGCTTTTAAAAGTACAGAACAGTTTAAATCTAATGAAGAAATCCTGAGTGAGCTCGAAAAGCATGGTGGGAATGCCGATTGTCAATCATTCAGGGATGGTATAGTATATGCCACATCCACATTTACTGAAGGTTTACAGACAGTTATGAATGTCTTATCTGATGGCATTTTTAGACAACATATTGACGATGATCTTGtgttgaaacaaaaagaaGTTGTTGAATTTGAGCTGGAAAATTTGGATTTGAGTCCAGACCCTGAACCTATCTTAACAGATTTAATACATGCAGCTGGATATCGAGATAACACATTAGGGCTGCCTAAGCTCTGTCCTAGAGAGAACTTGCTGAATATAGATGCATCGGTTATTACAGATTATATGGGTCGGTATTATGATCCATCAAGCATGGTTATTGCAGCTGTAAATGTCGACCACAATGAGATTGTTGAGCTGgccaggaaatattttgttaatgCAAGAACAACATGGAAACAAGACAGCACAGCATTACCTGATAAGTCTGTGGCACAATTTACAGGAGGCATAATCACAgATCATCGCACAGACCCACAAATCAACATGGGCCCCACACCATTACCAGAGTTGGCTCATGTTTCACTTGGCCTAGAGAGCACATCTTTTACTGACCCAGATTTCTTTGCCTTTGCTGTTCTCAATGCTCTTATGGGAGGAGGTGGATCTTTCTCTGCTGGAGGTCCAGGGAAGGGGATGTACTCAAGGCTGTACTTAAATGTTCTCAATCGCTATCACTGGATCTATGCCTGTACCGCATTTAATCACAGTTACATTGAcagtgggattttttgcatcaATGCAAGCTCACATCCGAGTCAGGTGTCGAATCTCATTCAGATTCTCTTGTATGAATATTTCAACTTGATAAACGGAGAATTTAGCGATGAGGAAGTGTCACGAGCTAAAAAACAACTTCAGtcgatgttgatgatgaatttAGAGTCTCGTATCGTCATGTTTGAAGATATTGGGAGACAAATTATTGGTCTCGGAATGCGACATACTGCACAAGAACTGTATGAGAAAATTGAATCAGTGACAATCAAAGACATGAAAAGAATCTCGGCAAGATTACTGGAATCAAAACCAGctttgggtgcctatggggaCTTGAGTAAATTGCCTTCATTTCAGGACGTTGAAAAAGCTTTGGTGAACAATGGCAAACTGCCTTCTGCATCGAGATTTTTCTCATTTAGATGA

Transcript

ENSAPQT00000002800

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9DC61	Mitochondrial-processing peptidase subunit alpha OS=Mus musculus OX=10090 GN=Pmpca PE=1 SV=1
Q5R513	Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii OX=9601 GN=PMPCA PE=2 SV=2
Q0P5M8	Mitochondrial-processing peptidase subunit alpha OS=Bos taurus OX=9913 GN=PMPCA PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006780 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05193 all species →	Peptidase_M16_C	Peptidase M16 inactive domain	Domain	Interproscan
PF00675 all species →	Peptidase_M16	Insulinase (Peptidase family M16)	Family	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011249 all species →	Homologous_superfamily	Metalloenzyme, LuxS/M16 peptidase-like	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR007863 all species →	Domain	Peptidase M16, C-terminal	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011765 all species →	Domain	Peptidase M16, N-terminal	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR050361 all species →	Family	Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase Complex	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11851 all species →	METALLOPROTEASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006627 all species →	Biological Process	protein processing involved in protein targeting to mitochondrion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01745	hutH, HAL; histidine ammonia-lyase	EC:4.3.1.3	Histidine metabolism	ko00340	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.