Gene detail

Detailed information of ENSAPQP00000002987.1 in Leptogorgia sarmentosa

Genomic Location: chr1:767041...806890
NR annotation: XP_028404849.1, cytoskeleton-associated protein 5-like isoform X1 [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSAPQT00000003494

ATGGCTGAAGAAGTAGACTTCACCAAAATACCTCTGGATGAAAGAGTTCAGCATAAGGTTTGGAAGGCCAGAGTAAGTGGGTATGAAGAGTGtgtaaaacatttcaaaaccatTGGTGATGAGAGCAGCGGTGAATATTCCAAATATGTTggtttattgaaaaaatttgTTGTGGACAGTAATGCTGTTGCACAAGAAAAAGGCCTCGATGCTGTTTTGGCATTTGTTGAGTATGCTTCGCCAACAATTTCTGGCAGAGCTGCTGGCGATGTTGTTGCTGGGGTGGTCACCAAATGTCTCAATGCCAGACCAAAAACGAAGCAAAAAGGCATCGACATCTGTATGTTGTACCTTGAGGTGGAGAAGCAGGAAGCTGTGCAGGAGGAAATTCTGAAGGGTCTGGATAATAAACAGCCAAAAGTCGTTGCTGGTTGTGTGACGTTCTTACGAATGGCCATAAGTGaatttggcgggaaaatattCGCGCTCAAACCCGTGGTTAAAGTTTTACCGAAACTGTTTGATCACAGCGATAAAAATGTTCGAGAAGAGACCAAATTGTTGacaattgaaatttataaatGGATCAAAGATGCAGTAAAAGCTCAGTTGACAAATATTAAACCTGTCCAGaTGAAAGAGTTAGAGGAGGAATGGGCAAAGCTAGATCCAACTCCACCAAAACCTACTCGGTTGACGAGATCTCAACAGGAAAAACAAGCACAAACACCCCAAACGGACGAGGTAGCGGAAAACAGCACTACCAGCGGAGATGCAGAAGAACCGCCAGAGATGGATGTCGTAGATCCTTATGACCTTCTCGATGCTGTTGATATTCTTTCTAAACTACCGAAAGACTTTTATGAAAACATGGCGGCAACAAAATGGTCGACAAGAAAAGAGGCGCTGGAACAACTGGACAAGTTAACCTCAAATCCAAAGATTGAAGGCGGACAGTTTGGAGAACTCATGACCGTATTGAAAAAGGCGATTACAAAAGATAGCAATGTTGTTGTGGTTGCTTTGGCTGGTAAATGCGTGGCTGGGCTGGCAACAGGATTACGGACGAAGTTTGCTCCATATGCATCGTCTGTTGTGTCAGCTATTTTGGAGAAGTTTAAAGAAAAGAAACAGAATGTCGTGACATCCCTTCGAGAGGCAATTGATGCTGTCTTTTTAACGACAAATATCGCTGCAATCCAGGAGGATGTGATTGCGTCCATATCAAGTAAAAATCCTAATGTAAGAGAGGAAACCATCAAATTTTTAACTCGGGTCTTCTGCAAGAGTAAACCAGCGGATTTGCCCAGACAGGTGTTGAAAGCAATCTGTGCAAGCTTGTCCAAGTGTATGGATGACACGACTGCTCCAGTACGTGATGCTGCCGCAGAAGCATTGGGTACATTGTTGAAACTGTTGGGAGAAAGATCTATGGGGCCTTTTGTTGATCAACTCGACAAAATTAAAGTAGACAAGGTTAAAGAATTTGCTGAGAAAGCGGAGATAACTGCCGCGCCCAGTCGCGGTGCACCGTCACAGCCAGCGAAAAAAACAGAGACAAAGCCTGCACCTGCAAAATCTACCGCCCCAAAATCTACGGGCAGTACAACCTCGAAAACCTCCTCAGCGGAAGCAAAAAAGAAACCTGCCACTGGTAAAGCTAAACCTTCAAGCTCATCTTCCGATACGACGAAAACGAAACCTGCAGCTAAAAAGACGACTGGTGGAAAGAAGCCCGCCAAAGCAGCCGCATCATTCAAAGATGACGAAGTGATGAAGGAACAAGAAATGACGGCAGAAGAAGTAGACGCTCAAGCGGAAGAAATAATTCCAGCCAATATTCGGGAACAACTTGGAAGTACTAACTGGAAAGAACGTTTAGCAGGAACTGAAGCTCTAACACAGTTGGTAAACGGACTGGATCCGAAAACTCTGCCTTCCCAAGTCTTGATCAGAACCATGGCAAAGAAACCAGGTTGGAAGGAAAGCAATTTCCAGgtTTTAAAGAACAAGTTTAATTTATGTGCTGTCATCGCAACACTTGCCACATCATTTTCCAAGAGAAGCGCGTTTTATGCTATATCTGGGCTTGTCGACAAAATTGGCGATATTAAGTTAAAAGATCAATGTAAAGAAACTCTGATGGTTTttgctgaaaatatttcattgaactATGTTAGTTTGAAGGTGTCGGGCTGTGCCAGCGAGCAGAAGAACCCCAAAGTTTTGGCTGAAAGTCTCAACTGGTTGGGAGATGCTATTAAAGCATTTGGAATGAAGATTGACATCAAACCTCATGTTAACTACATCAAGCAAAGTCTGGGCCATACCAATCCGTCTGTACGTTCTTCTGCTATAGCAACACTTGGCGTGATGTTCATGTATACTGGTCCCAGTCTTCGTATGTTCTTTGAAGGTGAAAAGTCAACTCTACTCCAGCAAATTGATAGTGAATTTGAAAAGGTGAAAAATGAAAAGCCCCCACCGCCAACTCGAGGTGTTGTAACCAGAAGTTCTGGTGGCGATGAAGGCAACGCAACAACTGCAGATGACGATGACAGTCAAGATACAACACCATCTGTGACAAACTTAGCTGACCTTATCCCTAGAACTGATATAAGCGCACAAATTAAACCTGAAATCATCACTGAACTAAGTGACAAGAAATGGCAAATCAGAGGTGAAGCATTACAAAAGGTGTCGGGAATATTGAATGAAGCGAAGTATATCACTCCAAACATTGGCGATCTGCCTGGAGCACTGAAGGCGCGCTTGGGAGATTCCAATAAGAATTTGATTATAACAACTTTGAATATTATGTCAGCTCTCGTAAAAGCGATGGGACCGGGTTCAGTGAAGCATGTGAAATCCCTTGTTCCTGCTGTTATTGCCAGTCTTGGTGATAGTAAGCCTCAAGTAAGAGCAGCGGCAATTTCGTGTTTGGATTCTTGGTTTGAGGAAACTGGTCTCGTGCCGCTTATCGAATCGGAAGTAATTAGCGGAACACTCGCTACTGATAATCCCAACATGAGAGCGGAGATGTTTGGTTGGCTCGGCGAAAAACTTCCAACTCAGAAGAAAGTTCCGGTCGAAGTGAATTTGATAATCCCAATTTTGTACTCTTGCTTGGAAAGCCGTAGTGCAGATGTCCGAAAGAAAGCTCAGGGCGCTTTACCGGCGTTTATGAACCTCGTTGGCTGGGATACCATGGTAAAACAGACTGGTAAATTGAAGCCTGCTTCGAAATCTGTGGTCATGGGTGTTTTAGAGAAGAATCGTCCTGAGCCAACTGCTAAAGCCGCTAGCGCAAGTAATGTCGCTGTTCAAAAAGCGACCTCTCAAAACAAAGCGCCTGAAAAAACGAAGACCCAAGACAAATCAACGGCACGTAAAAAATCGGATGATGGagctaaaaaaacaaaaactggTGCTGCCTCTAGTTCTTCGAAGACGTCCGCTGCAAAGGCAGCTAATGAGAAAGGAGGAGATGAAGGTCCTGTTTTACTGCCGAATCCAAATGGTAGAGAAAGCCGGATGAAGGCTGTGAAAGAACTGAAGGTTCTAAAATGGAACTTTACTGGCACGCCGCTGGATGAACATATTGACCAACTGAAGGAACAAATGAATGGCTGTGTTAGCAAGTCGATGTTAGAAAACCTGTTTAATAAGGACTTTAAATATCATGTCGTCGCTTTGGTTGCGCTTAGCAAGgcTATCACGCCAGTAAGTGACGGACCGCTAAAGTCCGAGGCCATCCAGAGTGCTGATGTTATTCTCAAATGGTGCACTTTAAGATTCTTCGATACGAATACAACTGTTTTGATCAAATGCTTGGAATTTTTGGAACTCTTTTTTACGCTTCTAGCAAACGAGCAATTCAAAATGTCTGAGTACGAAGCCTCCAGTTTCTTACCATATTTGATACAAAAGATTGGCGATCCCAAAGATGCCGTCCGTAAGATGATCCGTGGCTTGTTAAAGTGGGTAGTGAAAGTGTACCCAGCTAGCAAGCTTTTCAACTACATCGCAGACGGACTAAAGTCGAAAAATGCTAAAACTCGGGCGGAATGCTTGGGGGAGATCGCGCATTTGATATCTGTTCATGGTGAAAGTGTTTGTCAACCAAGTCCAGCGAAAGCCCTGCCTGCTGTAGCGGCACAAATCGCAGACCGAGACACTGCTGTCAGGAATGCAGCCTTGAATGCTATTGTGGAAGTTTACAATCTGGTTGGAGAGACCGTGTACAAGTACCTGGGACGGATTTCAGAAAAAGATCAAAGTTTACTCGAAGAACGCATTCGTCGATCTGGCAAAACCACAACTGCTGAACCTGTTAAAGCAGCAAGCCAGCCTACGAAAAAATCCAGCGACAGTGGAACTGCAGCAGTAAACAACACTCCAGTGGCGAAACCTCCGACATCTCAAAACAGACCTCAAACGGCCTCCACAGTTCAAGAAGATCAGTATTTTTCACTGGACTTTGATAAGATTGAAAAGACGTCCAGAAGTACGTCCAGCGGAATACCGTCCTTAATTGCGAATGATGACGTGGATGACCTTCTCAAAGAACCTGTTCCGACATTACCGCGAACTACAGCAAGCACTTCGTCTGGCAGTCGCGgtcgaaaaatgttttcaccCAACAGTTCCTCAGCCGCAGTTGATTATTGCGTGTCCCAGATTGCAAGTAATGACATTAGCTTGGCGATCATTTCTCTAAAAGAACTCGAAgaccattttcaaaacagtgGTCCCAATGTTTGGTTGAAACATCTTAATCAGTTTTTAATCGCGTGCGTCCTTCAACTACGGATGATTTTATCAACGCACTTGGTATCAGATGCTTACGAAGAAAAGGAAATAATCAACTTGTATAAATGTATCTTCAATAACTTCTTTAACATTCTCTTGGAACCAACGCTAGCACGCGAGATCCCGAAAGAGATTCTTAAGGATTTAATTCATGTGATGATCAGCACGCTCCCAGACGAAAATCTCATCAAACTCGTCGAAGGCCCCCAAGTGATCCGGTGTGTGAATAAACTGATGTTGCATTTCACGGCGAAACCTgataaaaatcatattttgagTTCCTTGATCAAGCTTCTCCAGGACAACGTTTCACATTGTTCCAGCACTACGAAATTCGTTGATTTGATAATGAAGTGCATCTGGCGTGTAACAAGAATGTTGCCTGTTAACATTCAAGAACTCAATTTAAGTCAAGTTTTACTCGACATTCATCATTTTATTGATGCTCATCCGACGGCATCATGGAAGAACCGACCGGATGATACTCCATTGAGAACCATCAAAACTGTTTTACATTCACTGATCAAGCTAAAAGGCGACCAGATTTTAGATCATATCAATCTTATCAACAATCCTGAGCAAAGTGAAATTGTACGATATATTCGTATCACGTTGAAGACGAACACAACAAAACCACAGATGAAGAAACAATCGTCCGTACAAGACGAGAAATCGTCACGTGAGCTTTCACCACTCTCGTCAAACGTTTCTAAGTCCAAAACGCAAAAGATCAGTCAGGAGCTTCATGACACGCTTGGAGAAATTTTCAGGAAAATCGGTGCAAAGGAGACGACATCGGAGGGATTAAATGCTCTTTACGACTTTCAACAAGAGCACAAAGATGTGGATATCAATCCTTTCTTGAAGCCGACttcagaattttttcaaaaatacgTTGCGAGAGGGCTGAAGACTGTCGAGGAAGAAAGAAAACGAACTACTCCAGAAAATATCGAACCTGAAATTACTGCTTCAAATGTTGTGGGTAATGCTTCATATTTCCGTGATCGACTACTCTCACTGCAGCATAAGTATGAAGGAGTTAAAGCAAAAAAGCCGGATGCCCGTATGAAAGAGAACGCCTCAGCAGTGTTGGCAGACAAACCTTCTTCAACACCAAGTGCTGCGGAAGATGATAACCTTGTTTTACCATCATTACCGAAAAGCAACACAGAAGAGACGTCCAGTTCTGTGGAGAAAACAGCAGGCGAAAGTGCGCCCGACTTGACAGAGTTACGAAAACGTTTAGAGAGAATCAAGAAAAAGGCAATATAG

Transcript

ENSAPQT00000003494

CTGATTTTCAAATGATtgtaagaaaaaaaacttgtacCCACACCAGATTTCGTAGCCGTGGACCAAGGATGACTCTGGGGGCATGGGGACGAGGTTGTCGTCCAGTTCGTTAGAGTTCAATGGCGGGAATctagaacaatttgatttgacaaaTTTCCAAATGCTTGtagctgattggttaaaagagATCACATGTCAAAAAGCAGACAAACCTGTGAAACAAATATGGACGAATATTCAGTATTTGGACACAGCCGTACAGCGAACACTTTCAAGAGTTAAATTTATCCGTTGTACACATGGCTGAAGAAGTAGACTTCACCAAAATACCTCTGGATGAAAGAGTTCAGCATAAGGTTTGGAAGGCCAGAGTAAGTGGGTATGAAGAGTGtgtaaaacatttcaaaaccatTGGTGATGAGAGCAGCGGTGAATATTCCAAATATGTTggtttattgaaaaaatttgTTGTGGACAGTAATGCTGTTGCACAAGAAAAAGGCCTCGATGCTGTTTTGGCATTTGTTGAGTATGCTTCGCCAACAATTTCTGGCAGAGCTGCTGGCGATGTTGTTGCTGGGGTGGTCACCAAATGTCTCAATGCCAGACCAAAAACGAAGCAAAAAGGCATCGACATCTGTATGTTGTACCTTGAGGTGGAGAAGCAGGAAGCTGTGCAGGAGGAAATTCTGAAGGGTCTGGATAATAAACAGCCAAAAGTCGTTGCTGGTTGTGTGACGTTCTTACGAATGGCCATAAGTGaatttggcgggaaaatattCGCGCTCAAACCCGTGGTTAAAGTTTTACCGAAACTGTTTGATCACAGCGATAAAAATGTTCGAGAAGAGACCAAATTGTTGacaattgaaatttataaatGGATCAAAGATGCAGTAAAAGCTCAGTTGACAAATATTAAACCTGTCCAGaTGAAAGAGTTAGAGGAGGAATGGGCAAAGCTAGATCCAACTCCACCAAAACCTACTCGGTTGACGAGATCTCAACAGGAAAAACAAGCACAAACACCCCAAACGGACGAGGTAGCGGAAAACAGCACTACCAGCGGAGATGCAGAAGAACCGCCAGAGATGGATGTCGTAGATCCTTATGACCTTCTCGATGCTGTTGATATTCTTTCTAAACTACCGAAAGACTTTTATGAAAACATGGCGGCAACAAAATGGTCGACAAGAAAAGAGGCGCTGGAACAACTGGACAAGTTAACCTCAAATCCAAAGATTGAAGGCGGACAGTTTGGAGAACTCATGACCGTATTGAAAAAGGCGATTACAAAAGATAGCAATGTTGTTGTGGTTGCTTTGGCTGGTAAATGCGTGGCTGGGCTGGCAACAGGATTACGGACGAAGTTTGCTCCATATGCATCGTCTGTTGTGTCAGCTATTTTGGAGAAGTTTAAAGAAAAGAAACAGAATGTCGTGACATCCCTTCGAGAGGCAATTGATGCTGTCTTTTTAACGACAAATATCGCTGCAATCCAGGAGGATGTGATTGCGTCCATATCAAGTAAAAATCCTAATGTAAGAGAGGAAACCATCAAATTTTTAACTCGGGTCTTCTGCAAGAGTAAACCAGCGGATTTGCCCAGACAGGTGTTGAAAGCAATCTGTGCAAGCTTGTCCAAGTGTATGGATGACACGACTGCTCCAGTACGTGATGCTGCCGCAGAAGCATTGGGTACATTGTTGAAACTGTTGGGAGAAAGATCTATGGGGCCTTTTGTTGATCAACTCGACAAAATTAAAGTAGACAAGGTTAAAGAATTTGCTGAGAAAGCGGAGATAACTGCCGCGCCCAGTCGCGGTGCACCGTCACAGCCAGCGAAAAAAACAGAGACAAAGCCTGCACCTGCAAAATCTACCGCCCCAAAATCTACGGGCAGTACAACCTCGAAAACCTCCTCAGCGGAAGCAAAAAAGAAACCTGCCACTGGTAAAGCTAAACCTTCAAGCTCATCTTCCGATACGACGAAAACGAAACCTGCAGCTAAAAAGACGACTGGTGGAAAGAAGCCCGCCAAAGCAGCCGCATCATTCAAAGATGACGAAGTGATGAAGGAACAAGAAATGACGGCAGAAGAAGTAGACGCTCAAGCGGAAGAAATAATTCCAGCCAATATTCGGGAACAACTTGGAAGTACTAACTGGAAAGAACGTTTAGCAGGAACTGAAGCTCTAACACAGTTGGTAAACGGACTGGATCCGAAAACTCTGCCTTCCCAAGTCTTGATCAGAACCATGGCAAAGAAACCAGGTTGGAAGGAAAGCAATTTCCAGgtTTTAAAGAACAAGTTTAATTTATGTGCTGTCATCGCAACACTTGCCACATCATTTTCCAAGAGAAGCGCGTTTTATGCTATATCTGGGCTTGTCGACAAAATTGGCGATATTAAGTTAAAAGATCAATGTAAAGAAACTCTGATGGTTTttgctgaaaatatttcattgaactATGTTAGTTTGAAGGTGTCGGGCTGTGCCAGCGAGCAGAAGAACCCCAAAGTTTTGGCTGAAAGTCTCAACTGGTTGGGAGATGCTATTAAAGCATTTGGAATGAAGATTGACATCAAACCTCATGTTAACTACATCAAGCAAAGTCTGGGCCATACCAATCCGTCTGTACGTTCTTCTGCTATAGCAACACTTGGCGTGATGTTCATGTATACTGGTCCCAGTCTTCGTATGTTCTTTGAAGGTGAAAAGTCAACTCTACTCCAGCAAATTGATAGTGAATTTGAAAAGGTGAAAAATGAAAAGCCCCCACCGCCAACTCGAGGTGTTGTAACCAGAAGTTCTGGTGGCGATGAAGGCAACGCAACAACTGCAGATGACGATGACAGTCAAGATACAACACCATCTGTGACAAACTTAGCTGACCTTATCCCTAGAACTGATATAAGCGCACAAATTAAACCTGAAATCATCACTGAACTAAGTGACAAGAAATGGCAAATCAGAGGTGAAGCATTACAAAAGGTGTCGGGAATATTGAATGAAGCGAAGTATATCACTCCAAACATTGGCGATCTGCCTGGAGCACTGAAGGCGCGCTTGGGAGATTCCAATAAGAATTTGATTATAACAACTTTGAATATTATGTCAGCTCTCGTAAAAGCGATGGGACCGGGTTCAGTGAAGCATGTGAAATCCCTTGTTCCTGCTGTTATTGCCAGTCTTGGTGATAGTAAGCCTCAAGTAAGAGCAGCGGCAATTTCGTGTTTGGATTCTTGGTTTGAGGAAACTGGTCTCGTGCCGCTTATCGAATCGGAAGTAATTAGCGGAACACTCGCTACTGATAATCCCAACATGAGAGCGGAGATGTTTGGTTGGCTCGGCGAAAAACTTCCAACTCAGAAGAAAGTTCCGGTCGAAGTGAATTTGATAATCCCAATTTTGTACTCTTGCTTGGAAAGCCGTAGTGCAGATGTCCGAAAGAAAGCTCAGGGCGCTTTACCGGCGTTTATGAACCTCGTTGGCTGGGATACCATGGTAAAACAGACTGGTAAATTGAAGCCTGCTTCGAAATCTGTGGTCATGGGTGTTTTAGAGAAGAATCGTCCTGAGCCAACTGCTAAAGCCGCTAGCGCAAGTAATGTCGCTGTTCAAAAAGCGACCTCTCAAAACAAAGCGCCTGAAAAAACGAAGACCCAAGACAAATCAACGGCACGTAAAAAATCGGATGATGGagctaaaaaaacaaaaactggTGCTGCCTCTAGTTCTTCGAAGACGTCCGCTGCAAAGGCAGCTAATGAGAAAGGAGGAGATGAAGGTCCTGTTTTACTGCCGAATCCAAATGGTAGAGAAAGCCGGATGAAGGCTGTGAAAGAACTGAAGGTTCTAAAATGGAACTTTACTGGCACGCCGCTGGATGAACATATTGACCAACTGAAGGAACAAATGAATGGCTGTGTTAGCAAGTCGATGTTAGAAAACCTGTTTAATAAGGACTTTAAATATCATGTCGTCGCTTTGGTTGCGCTTAGCAAGgcTATCACGCCAGTAAGTGACGGACCGCTAAAGTCCGAGGCCATCCAGAGTGCTGATGTTATTCTCAAATGGTGCACTTTAAGATTCTTCGATACGAATACAACTGTTTTGATCAAATGCTTGGAATTTTTGGAACTCTTTTTTACGCTTCTAGCAAACGAGCAATTCAAAATGTCTGAGTACGAAGCCTCCAGTTTCTTACCATATTTGATACAAAAGATTGGCGATCCCAAAGATGCCGTCCGTAAGATGATCCGTGGCTTGTTAAAGTGGGTAGTGAAAGTGTACCCAGCTAGCAAGCTTTTCAACTACATCGCAGACGGACTAAAGTCGAAAAATGCTAAAACTCGGGCGGAATGCTTGGGGGAGATCGCGCATTTGATATCTGTTCATGGTGAAAGTGTTTGTCAACCAAGTCCAGCGAAAGCCCTGCCTGCTGTAGCGGCACAAATCGCAGACCGAGACACTGCTGTCAGGAATGCAGCCTTGAATGCTATTGTGGAAGTTTACAATCTGGTTGGAGAGACCGTGTACAAGTACCTGGGACGGATTTCAGAAAAAGATCAAAGTTTACTCGAAGAACGCATTCGTCGATCTGGCAAAACCACAACTGCTGAACCTGTTAAAGCAGCAAGCCAGCCTACGAAAAAATCCAGCGACAGTGGAACTGCAGCAGTAAACAACACTCCAGTGGCGAAACCTCCGACATCTCAAAACAGACCTCAAACGGCCTCCACAGTTCAAGAAGATCAGTATTTTTCACTGGACTTTGATAAGATTGAAAAGACGTCCAGAAGTACGTCCAGCGGAATACCGTCCTTAATTGCGAATGATGACGTGGATGACCTTCTCAAAGAACCTGTTCCGACATTACCGCGAACTACAGCAAGCACTTCGTCTGGCAGTCGCGgtcgaaaaatgttttcaccCAACAGTTCCTCAGCCGCAGTTGATTATTGCGTGTCCCAGATTGCAAGTAATGACATTAGCTTGGCGATCATTTCTCTAAAAGAACTCGAAgaccattttcaaaacagtgGTCCCAATGTTTGGTTGAAACATCTTAATCAGTTTTTAATCGCGTGCGTCCTTCAACTACGGATGATTTTATCAACGCACTTGGTATCAGATGCTTACGAAGAAAAGGAAATAATCAACTTGTATAAATGTATCTTCAATAACTTCTTTAACATTCTCTTGGAACCAACGCTAGCACGCGAGATCCCGAAAGAGATTCTTAAGGATTTAATTCATGTGATGATCAGCACGCTCCCAGACGAAAATCTCATCAAACTCGTCGAAGGCCCCCAAGTGATCCGGTGTGTGAATAAACTGATGTTGCATTTCACGGCGAAACCTgataaaaatcatattttgagTTCCTTGATCAAGCTTCTCCAGGACAACGTTTCACATTGTTCCAGCACTACGAAATTCGTTGATTTGATAATGAAGTGCATCTGGCGTGTAACAAGAATGTTGCCTGTTAACATTCAAGAACTCAATTTAAGTCAAGTTTTACTCGACATTCATCATTTTATTGATGCTCATCCGACGGCATCATGGAAGAACCGACCGGATGATACTCCATTGAGAACCATCAAAACTGTTTTACATTCACTGATCAAGCTAAAAGGCGACCAGATTTTAGATCATATCAATCTTATCAACAATCCTGAGCAAAGTGAAATTGTACGATATATTCGTATCACGTTGAAGACGAACACAACAAAACCACAGATGAAGAAACAATCGTCCGTACAAGACGAGAAATCGTCACGTGAGCTTTCACCACTCTCGTCAAACGTTTCTAAGTCCAAAACGCAAAAGATCAGTCAGGAGCTTCATGACACGCTTGGAGAAATTTTCAGGAAAATCGGTGCAAAGGAGACGACATCGGAGGGATTAAATGCTCTTTACGACTTTCAACAAGAGCACAAAGATGTGGATATCAATCCTTTCTTGAAGCCGACttcagaattttttcaaaaatacgTTGCGAGAGGGCTGAAGACTGTCGAGGAAGAAAGAAAACGAACTACTCCAGAAAATATCGAACCTGAAATTACTGCTTCAAATGTTGTGGGTAATGCTTCATATTTCCGTGATCGACTACTCTCACTGCAGCATAAGTATGAAGGAGTTAAAGCAAAAAAGCCGGATGCCCGTATGAAAGAGAACGCCTCAGCAGTGTTGGCAGACAAACCTTCTTCAACACCAAGTGCTGCGGAAGATGATAACCTTGTTTTACCATCATTACCGAAAAGCAACACAGAAGAGACGTCCAGTTCTGTGGAGAAAACAGCAGGCGAAAGTGCGCCCGACTTGACAGAGTTACGAAAACGTTTAGAGAGAATCAAGAAAAAGGCAATATAGTCGATGTATAGGAAAAATATAGGAAAAATAActtataaataaaaaacaatatagTTGAAAAACTTTTGCTTATTGTgtctttttagtgcaaagtttcttcgAATCTTTGCAGCATTGTGATTaggggcgaaaattcacattgGTCATTCAGTCATCGCAGTCaatcattcatagtgtaaactccggggggcgCGTCCCAACATTAGAATATCGTGTTCTGATCGATTGAACAGCGTGACGTACGCTGTAGCCacgctctgattggttgaacagCGTGACGTATGCTGTAGCCGTGCTCTGAAGTGGGTTGCCAATTTATTTGAAtatatgcaaaaatgtttaatttatgcaaagcTTTATGGACGATTACTAAAAAAGTTATTAGCTGTGATAGAAGATTAAAATACTGCTTGATTAGTGTTCTTTGCAACGACAGTAGGGTAAGCACATTGGACTTGAATCCAgtatgatatcgaatgatatcctaTTGCAGTCTTGGGAAATGCAACTTTCTATTCTaattcaaacattgttgaaacttggccacATTACTGATTCAAGGCCCACTctttagcgtccgccatattgtgtacaacacaaatatttcatcccagGAACACGAAATTCCGCAGGGGCTTTGCGGCATGTGTACTATAACTTCAGGCATCTTAGATCACATTACTTGTCTAgctcagtggcgtaacgcaacctctgggggccctccgacagtcgaccactttggggccccctttgctccactaattagtaggctgaatttaccacttatgtctacacaacgacaaacctcactttgttacagaatagactcgaacccgaatttgaatttaatgaatttcgcttctctcttccaaacctgcctatctgtctgtttttcgtatttgaattcccc

Protein

ENSAPQP00000002987.1

MAEEVDFTKIPLDERVQHKVWKARVSGYEECVKHFKTIGDESSGEYSKYVGLLKKFVVDSNAVAQEKGLDAVLAFVEYASPTISGRAAGDVVAGVVTKCLNARPKTKQKGIDICMLYLEVEKQEAVQEEILKGLDNKQPKVVAGCVTFLRMAISEFGGKIFALKPVVKVLPKLFDHSDKNVREETKLLTIEIYKWIKDAVKAQLTNIKPVQMKELEEEWAKLDPTPPKPTRLTRSQQEKQAQTPQTDEVAENSTTSGDAEEPPEMDVVDPYDLLDAVDILSKLPKDFYENMAATKWSTRKEALEQLDKLTSNPKIEGGQFGELMTVLKKAITKDSNVVVVALAGKCVAGLATGLRTKFAPYASSVVSAILEKFKEKKQNVVTSLREAIDAVFLTTNIAAIQEDVIASISSKNPNVREETIKFLTRVFCKSKPADLPRQVLKAICASLSKCMDDTTAPVRDAAAEALGTLLKLLGERSMGPFVDQLDKIKVDKVKEFAEKAEITAAPSRGAPSQPAKKTETKPAPAKSTAPKSTGSTTSKTSSAEAKKKPATGKAKPSSSSSDTTKTKPAAKKTTGGKKPAKAAASFKDDEVMKEQEMTAEEVDAQAEEIIPANIREQLGSTNWKERLAGTEALTQLVNGLDPKTLPSQVLIRTMAKKPGWKESNFQVLKNKFNLCAVIATLATSFSKRSAFYAISGLVDKIGDIKLKDQCKETLMVFAENISLNYVSLKVSGCASEQKNPKVLAESLNWLGDAIKAFGMKIDIKPHVNYIKQSLGHTNPSVRSSAIATLGVMFMYTGPSLRMFFEGEKSTLLQQIDSEFEKVKNEKPPPPTRGVVTRSSGGDEGNATTADDDDSQDTTPSVTNLADLIPRTDISAQIKPEIITELSDKKWQIRGEALQKVSGILNEAKYITPNIGDLPGALKARLGDSNKNLIITTLNIMSALVKAMGPGSVKHVKSLVPAVIASLGDSKPQVRAAAISCLDSWFEETGLVPLIESEVISGTLATDNPNMRAEMFGWLGEKLPTQKKVPVEVNLIIPILYSCLESRSADVRKKAQGALPAFMNLVGWDTMVKQTGKLKPASKSVVMGVLEKNRPEPTAKAASASNVAVQKATSQNKAPEKTKTQDKSTARKKSDDGAKKTKTGAASSSSKTSAAKAANEKGGDEGPVLLPNPNGRESRMKAVKELKVLKWNFTGTPLDEHIDQLKEQMNGCVSKSMLENLFNKDFKYHVVALVALSKAITPVSDGPLKSEAIQSADVILKWCTLRFFDTNTTVLIKCLEFLELFFTLLANEQFKMSEYEASSFLPYLIQKIGDPKDAVRKMIRGLLKWVVKVYPASKLFNYIADGLKSKNAKTRAECLGEIAHLISVHGESVCQPSPAKALPAVAAQIADRDTAVRNAALNAIVEVYNLVGETVYKYLGRISEKDQSLLEERIRRSGKTTTAEPVKAASQPTKKSSDSGTAAVNNTPVAKPPTSQNRPQTASTVQEDQYFSLDFDKIEKTSRSTSSGIPSLIANDDVDDLLKEPVPTLPRTTASTSSGSRGRKMFSPNSSSAAVDYCVSQIASNDISLAIISLKELEDHFQNSGPNVWLKHLNQFLIACVLQLRMILSTHLVSDAYEEKEIINLYKCIFNNFFNILLEPTLAREIPKEILKDLIHVMISTLPDENLIKLVEGPQVIRCVNKLMLHFTAKPDKNHILSSLIKLLQDNVSHCSSTTKFVDLIMKCIWRVTRMLPVNIQELNLSQVLLDIHHFIDAHPTASWKNRPDDTPLRTIKTVLHSLIKLKGDQILDHINLINNPEQSEIVRYIRITLKTNTTKPQMKKQSSVQDEKSSRELSPLSSNVSKSKTQKISQELHDTLGEIFRKIGAKETTSEGLNALYDFQQEHKDVDINPFLKPTSEFFQKYVARGLKTVEEERKRTTPENIEPEITASNVVGNASYFRDRLLSLQHKYEGVKAKKPDARMKENASAVLADKPSSTPSAAEDDNLVLPSLPKSNTEETSSSVEKTAGESAPDLTELRKRLERIKKKAI

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14008	Cytoskeleton-associated protein 5 OS=Homo sapiens OX=9606 GN=CKAP5 PE=1 SV=3
A2AGT5	Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1
Q9PT63	Cytoskeleton-associated protein 5-A OS=Xenopus laevis OX=8355 GN=ckap5-a PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002526 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21040 all species →	CEP104-like_TOG	Centrosomal protein CEP104-like, TOG domain	Repeat	Interproscan
PF21041 all species →	XMAP215_CLASP_TOG	XMAP215/Dis1/CLASP, TOG domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045110 all species →	Family	XMAP215	Interproscan
IPR034085 all species →	Domain	TOG domain	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR021133 all species →	Repeat	HEAT, type 2	Interproscan
IPR048491 all species →	Domain	XMAP215/Dis1/CLASP, TOG domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12609 all species →	MICROTUBULE ASSOCIATED PROTEIN XMAP215	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000776 all species →	Cellular Component	kinetochore	Interproscan
GO:0000922 all species →	Cellular Component	spindle pole	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0007051 all species →	Biological Process	spindle organization	Interproscan
GO:0007052 all species →	Biological Process	mitotic spindle organization	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0030951 all species →	Biological Process	establishment or maintenance of microtubule cytoskeleton polarity	Interproscan
GO:0035371 all species →	Cellular Component	microtubule plus-end	Interproscan
GO:0046785 all species →	Biological Process	microtubule polymerization	Interproscan
GO:0051010 all species →	Molecular Function	microtubule plus-end binding	Interproscan
GO:0051298 all species →	Biological Process	centrosome duplication	Interproscan
GO:0061863 all species →	Molecular Function	microtubule plus end polymerase	Interproscan
GO:0015631 all species →	Molecular Function	tubulin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16803	CKAP5; cytoskeleton-associated protein 5	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Co-expression network

Genes whose expression across the transcriptome samples of Leptogorgia sarmentosa tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.

No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.

Single-cell expression

Whether this gene can be visualised in the single-cell atlases of Leptogorgia sarmentosa, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.

No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.

Epigenetic marks

Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.

No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.

What you can do with this gene

Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.

Analysis	What it does	Status
Primer design	Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed.	template found	open →
BLAST	Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start.	template found	open →
Expression heatmap	Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it.	no expression matrix	–
Gene family / orthogroup	Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue.		open →
Gene set analysis	Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it.		open →