Gene detail

Detailed information of ENSAPQP00000003701.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4005183.1, Prolyl 3-hydroxylase 2 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000004306

ATGGCTGGCCGCGCAAGTTTTGCGCTCACTTTAATGCTCATGTTCATTAGCATAAAAGGCGACGATATTTCCTCGAGCGTTCAAGTTAACGCGGCGTATGACGAACTGTATGCGGACGCTCTGCGTCTCTATTATCAGGATGACTGGGCAAATGCAATTCTAAAATTCGAAGCAGCAATTGAGGATTGGAAGAAGGAAAGAAAATTCACAATAAGTTGTAGGAAAGAATGTAAGGATGCGTTCGACGCGAGTAGAGAAGGACAGAAGGCGTCGTTTTCGCTCGAATATTTGCGCTACTTGGGTTATATGAGAACATGTTCACATGCGTGTATGGAGAAGAACATGGGAAAGCGACTGAAGGTGTCGAAGCACACTCACCGTCGGTTTGAAGACCGCATACCGTACAGTTTTATGCAATTTGCTTATCATAAGAGTGGCAACAACAGAATGGGTATTCAAGCGGCATCAACCTATCTCCGTTTCAACCCGAAAGATGAGCAAATGCATGATAATATGAAGTACTACAGCGGCCTTCCTGAGTTGCAGGATATTGTGGTGGATGATATCGAAAGTATCGCACCAATAGAACACCACGAGTTATACGAGAAGGGACGGAAAGTGTACAATGCTAAAAACTATTCAAAAACTGTCGAATACTTTGAAGCATCGATCAAGGAATACATCAAAGCTTACGAGGAATGCAAAACACTTTGCGAGGTCGAGGTGGAAGGAGGACAACAGTATATACGTGGCGGTATCTATGGATACCATATGCAATTGTTATTATGTACACTCGACTGTCCCAGGAAGCTTTCAATGTTGTTAAATTATCCTCAACCTGGATACCTGAGCAAGCAATTTGATTTCCTGCATTACTCCTACACTCAACtgaaGCGTCAAGATGATGCCCTCCCTTGCGCAGTCACCACTCTCTTGCTCAACCCGCTAAGCAAACACATGAAGTCCAACATGGACTATTACAATGAAATGGGACATTCAGTCGGTGATATTCAACCCAGAGAGGACGGCAAATATTTATACGAAGACATTAAATCCCAAATGGAACTGCTCCTTGAAGTCAAAGCTTACTTATTGGACTTGGATGAAGAATACAAAGGCACTGAGAACCTCGCGGACACGACGTACGAGACCTTCCTCAAACACGGGCTGTTTCCTGATGAACGCCCGCCGGAAGAGGAGAAGCCAGAGACTGAAGCAGAGAAACAAGCAAAGAAGGAAGAAGAATTCAAAGATGAACCTTACAAAAGGTTTTCTCCGCCGACGAAAGAGCACGTTGAAAAATTCTTGAGCGAAGGTCAAGACGATGAGAATTTAAAGGGCATTTCGCTTACGATGATGGAACAGCAGTTAAATGGATCATATCGAGCTGTATTTGATGGTGTTGCCAGTGCTGACGAATGCAAGAAATTGGCCGACCTTGGTTTGACCTTGGGCCACGCAGGGGATGGTTACAAGGATGACCCCAGACCACATACGGTTAAAGAGGAATTCCTTGGAGTAAATGTGAACAACGCTACTTGGGCGGCGGCAAAAGGAGAAATCAGCGTAGATGAACCAGAACTGTATTTGAAGCTCAGCGAAAAAGTTCGTGTTGTAGCTGAGAAGTACTTCCAATTATCAACACCACTGTATTTCAGCTATACACATCTTGTGTGCAGAAAAGCACTCTCAGAAGAAAAGGAGAAAGGTATGCACATCAGCCATCCAGTGCATTCTGATAACTGTGTCTTAAAATTCCACGGTAAAAATGTGACATGCGTCAAAGAGTTCCCAGCTTTTACCTGGAGAGATTACAGTGCTATTTTGTACCTGAATGAGGAGTTTACTGGAGGACAATTCATATTCGCAAGAAAGAATCAAACTGTCGAGGCGATCGTAAAACCGCAGTGTGGTCGTATGGTGACGTTCTCTGCTGGCGTAGAGAATCTTCACGGCGTGTTAGGCATTAAAGAAGGCACACGATGCGCCCTGGCGTTGTGGTTTACCCTGGACAAAAGATACGATGAACAACAACGCCATGATGCTGTTGAGGTTCTACGACATTTACGGCAAGACAAGAACTCTGAAGAAGCGAATCAAGGTCATAAAGAGCTGTAG

Transcript

ENSAPQT00000004306

ttttaaccaccagtcaatatttgtttaacTGAAACGAGGGGACTTTACGTGACTCATGACATTATTCCGACAGCGTTTATATCAACACAGATATCAGTGATCAACATTGATTAAtctaatataatttattaacacAATTGAACCCTTATTCCACCCGGAAGTGATCGTTGCATATCAGTATTACCACGTATTACTCACGATGCCACACAATGAATGCTTGTCCCTATAAAACACGCCGACGTTGAATTCTCGTCGAATATAACAAGGCAAAACGAAGCGATTTTAACGACGTTTCTGCTATGGCTGGCCGCGCAAGTTTTGCGCTCACTTTAATGCTCATGTTCATTAGCATAAAAGGCGACGATATTTCCTCGAGCGTTCAAGTTAACGCGGCGTATGACGAACTGTATGCGGACGCTCTGCGTCTCTATTATCAGGATGACTGGGCAAATGCAATTCTAAAATTCGAAGCAGCAATTGAGGATTGGAAGAAGGAAAGAAAATTCACAATAAGTTGTAGGAAAGAATGTAAGGATGCGTTCGACGCGAGTAGAGAAGGACAGAAGGCGTCGTTTTCGCTCGAATATTTGCGCTACTTGGGTTATATGAGAACATGTTCACATGCGTGTATGGAGAAGAACATGGGAAAGCGACTGAAGGTGTCGAAGCACACTCACCGTCGGTTTGAAGACCGCATACCGTACAGTTTTATGCAATTTGCTTATCATAAGAGTGGCAACAACAGAATGGGTATTCAAGCGGCATCAACCTATCTCCGTTTCAACCCGAAAGATGAGCAAATGCATGATAATATGAAGTACTACAGCGGCCTTCCTGAGTTGCAGGATATTGTGGTGGATGATATCGAAAGTATCGCACCAATAGAACACCACGAGTTATACGAGAAGGGACGGAAAGTGTACAATGCTAAAAACTATTCAAAAACTGTCGAATACTTTGAAGCATCGATCAAGGAATACATCAAAGCTTACGAGGAATGCAAAACACTTTGCGAGGTCGAGGTGGAAGGAGGACAACAGTATATACGTGGCGGTATCTATGGATACCATATGCAATTGTTATTATGTACACTCGACTGTCCCAGGAAGCTTTCAATGTTGTTAAATTATCCTCAACCTGGATACCTGAGCAAGCAATTTGATTTCCTGCATTACTCCTACACTCAACtgaaGCGTCAAGATGATGCCCTCCCTTGCGCAGTCACCACTCTCTTGCTCAACCCGCTAAGCAAACACATGAAGTCCAACATGGACTATTACAATGAAATGGGACATTCAGTCGGTGATATTCAACCCAGAGAGGACGGCAAATATTTATACGAAGACATTAAATCCCAAATGGAACTGCTCCTTGAAGTCAAAGCTTACTTATTGGACTTGGATGAAGAATACAAAGGCACTGAGAACCTCGCGGACACGACGTACGAGACCTTCCTCAAACACGGGCTGTTTCCTGATGAACGCCCGCCGGAAGAGGAGAAGCCAGAGACTGAAGCAGAGAAACAAGCAAAGAAGGAAGAAGAATTCAAAGATGAACCTTACAAAAGGTTTTCTCCGCCGACGAAAGAGCACGTTGAAAAATTCTTGAGCGAAGGTCAAGACGATGAGAATTTAAAGGGCATTTCGCTTACGATGATGGAACAGCAGTTAAATGGATCATATCGAGCTGTATTTGATGGTGTTGCCAGTGCTGACGAATGCAAGAAATTGGCCGACCTTGGTTTGACCTTGGGCCACGCAGGGGATGGTTACAAGGATGACCCCAGACCACATACGGTTAAAGAGGAATTCCTTGGAGTAAATGTGAACAACGCTACTTGGGCGGCGGCAAAAGGAGAAATCAGCGTAGATGAACCAGAACTGTATTTGAAGCTCAGCGAAAAAGTTCGTGTTGTAGCTGAGAAGTACTTCCAATTATCAACACCACTGTATTTCAGCTATACACATCTTGTGTGCAGAAAAGCACTCTCAGAAGAAAAGGAGAAAGGTATGCACATCAGCCATCCAGTGCATTCTGATAACTGTGTCTTAAAATTCCACGGTAAAAATGTGACATGCGTCAAAGAGTTCCCAGCTTTTACCTGGAGAGATTACAGTGCTATTTTGTACCTGAATGAGGAGTTTACTGGAGGACAATTCATATTCGCAAGAAAGAATCAAACTGTCGAGGCGATCGTAAAACCGCAGTGTGGTCGTATGGTGACGTTCTCTGCTGGCGTAGAGAATCTTCACGGCGTGTTAGGCATTAAAGAAGGCACACGATGCGCCCTGGCGTTGTGGTTTACCCTGGACAAAAGATACGATGAACAACAACGCCATGATGCTGTTGAGGTTCTACGACATTTACGGCAAGACAAGAACTCTGAAGAAGCGAATCAAGGTCATAAAGAGCTGTAGTATTCAACAACgttcaatgaaaataattttagcGTCGGAGTTCCGCCTCAATCACTTTTTATAACAGCAACTGCTTATTCAAATTCCATTGTAAAAGCCATGtacatttgaagagtttttcatgttgtgaatttaattttatacGCTATTTTAGCACCATGCTTCGCTTTATTTTGCCAACATATTTTGTAacacgaaaatatttttgtaccaAAATGGTTGATAAACGCATCAAGATAAGGTAACGATACAAAATCTGACTTCAATGAATGTTATTTGAAAATTGTTCCATATAAATGACACAACATCAAAGAACATTCGCACACATTCTCAGTTAACATGCATTGAAGTCagattttcaataattttggtCAATCAGCAATTGATGTTAAGAGAATAAATGTTAATTCCATTTATTATCTTCTATGTCAAAATGTCATCTTTTCCACCAAAACAGAGCTGAGAAACGTAGTATTTTACTCATTAATTGTCAACAGCAACTTGATTGTCACCGAGTTCCCCCGAAGTCAACGCCAGTGCCTCCGTTTGCTGCTAACGAGTTTCATTTGAAACGCCCTCCCGTGCGCTATCGTTCAATTATCCTACCGTAATGATTTCAAACCGTTGAACTTGACTTGACTTGATTGAAGAGAGTGTTTTTGATAACCTGTGACATCAATCCATGTATCGCTTCGATTGTCGTTTTTGAactaaaaaaagaaaacgaagAACCAGATTCAAATGATCCACCAAGGTAAAGTCTTTGAAATCATCCGCCAAGGTAAAGGTACATCAGAATCATTGATCCAGCAACTCGACTGATGAAGTTTATGAacaaataaatagaaaaaCGTGACAATAAAATTGCCAAACCCTTGACCTGTCTTTGCTggtttttgacaattttccTTCCTCTTTCTTCTCAACATCGCCGCTGGGGAAATAGCCACTCATTCGTCCAACCTGaagaaaatatcaacaaactCATGAAGGGAAGAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q32P28	Prolyl 3-hydroxylase 1 OS=Homo sapiens OX=9606 GN=P3H1 PE=1 SV=2
Q8CG71	Prolyl 3-hydroxylase 2 OS=Mus musculus OX=10090 GN=P3h2 PE=1 SV=1
Q8IVL5	Prolyl 3-hydroxylase 2 OS=Homo sapiens OX=9606 GN=P3H2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004255 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13640 all species →	2OG-FeII_Oxy_3	2OG-Fe(II) oxygenase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005123 all species →	Domain	Oxoglutarate/iron-dependent dioxygenase	Interproscan
IPR044862 all species →	Domain	Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain	Interproscan
IPR039575 all species →	Family	Prolyl 3-hydroxylase	Interproscan
IPR006620 all species →	Domain	Prolyl 4-hydroxylase, alpha subunit	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14049 all species →	LEPRECAN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0032963 all species →	Biological Process	collagen metabolic process	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0031418 all species →	Molecular Function	L-ascorbic acid binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000003701.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.